Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2339 |
Symbol | |
ID | 7318128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 2462685 |
End bp | 2464016 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643617239 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_002514406 |
Protein GI | 220935507 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.247119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCA CCATCTACGG TTCCGGTTAC GTGGGACTGG TCACTGGCGC CTGCCTGGCC CAGGTCGGTA ACCATGTCAT GTGTGTGGAT ATCGATCCCG CCAAGATCGA GGGCCTCAAG CAGGGCCAGA TCCCCATCTA CGAGCCGGGC CTGGAGGACA TGGTCCTGGA CAACATCCGT GCCGGGCGCC TGACCTTCAC CCTGGACCCC GCCGAGGGCG TCCGTCACGG CCTGTTCCAG TTCATCGCCG TGGGCACCCC CCCGGACGAG GACGGCTCCG CCGACCTCTC CCACGTGCTC ACCGTGGCCC GCAGCATCGC CGAGAACCTC TCCGAGTACC GCATCGTGGT GAACAAGTCC ACGGTCCCGG TGGGCACCGC CGACCGGGTG CGCGAGACCA TCCAGAAGGT CCTGGCGGAG CGCGGCAACG GGGGCGAATT CGACGTGGTC TCCAACCCGG AATTCCTCAA GGAAGGCGCC GCCATCGAGG ACTTCATGAA GCCCGACCGG GTGGTGGTGG GTACCGACAA CCCCCGCACC GCCGAGCTGA TGCGGGCCCT GTACGCCCCC TTCAACCGCA GCCATGACCG GGTCATCGTC ATGGATGTGC GTTCCGCAGA GCTGACCAAG TACGCCGCCA ACGCCATGCT GGCCACCAAG ATCAGCTTCA TGAACGAGCT GGCCAACCTG GCCGAGAAGC TCGGTGCCGA CATCGAGCAG GTGCGCCAGG GCATCGGCTC CGACCCCCGC ATCGGCTACC ACTTCATCTA TCCCGGTTGC GGCTACGGCG GCTCCTGTTT CCCCAAGGAC GTCAAGGCCC TGGAGCGCAC CGCCCGCCAG GTGGGCTACC AGGCCAGCCT GCTGGAGGCC GTGGAGGCGG TCAACGACCG CCAGAAGGAG CGCCTGTTCC AGAAGATCAC CCGCCACTTC GGCGAGGACC TCTCCGGCCG CACCTTCGCC CTCTGGGGCC TGGCCTTCAA GCCCAACACC GACGACATGC GCGAGGCCTC CAGCCGGGTG CTCATGGAGG CCCTCTGGGC CGCCGGCGCC AAGGTGCGGG CCTTCGACCC GGTGGCCGAG GAGGAATGCG AGCGGATCTA CGGCAAGCGC GACGACCTCA CCCTGTGCGA GAGCCCTGAA CAGGCCCTGG AGGGCGCCGA TGCCCTGGCC ATCGTCACCG AGTGGAACGT GTTCCGCAGC CCCGACTTCG ACCAGATCCG CCAGGCCCTC AAGCAGCCCG CGATCTTCGA CGGCCGCAAC CTCTACGATC CAGAGCACAT GGCCTCCATG GGCTTCGACT ACTACGCCAT CGGCCGCGGC AAGACGGCGT AA
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Protein sequence | MKVTIYGSGY VGLVTGACLA QVGNHVMCVD IDPAKIEGLK QGQIPIYEPG LEDMVLDNIR AGRLTFTLDP AEGVRHGLFQ FIAVGTPPDE DGSADLSHVL TVARSIAENL SEYRIVVNKS TVPVGTADRV RETIQKVLAE RGNGGEFDVV SNPEFLKEGA AIEDFMKPDR VVVGTDNPRT AELMRALYAP FNRSHDRVIV MDVRSAELTK YAANAMLATK ISFMNELANL AEKLGADIEQ VRQGIGSDPR IGYHFIYPGC GYGGSCFPKD VKALERTARQ VGYQASLLEA VEAVNDRQKE RLFQKITRHF GEDLSGRTFA LWGLAFKPNT DDMREASSRV LMEALWAAGA KVRAFDPVAE EECERIYGKR DDLTLCESPE QALEGADALA IVTEWNVFRS PDFDQIRQAL KQPAIFDGRN LYDPEHMASM GFDYYAIGRG KTA
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