Gene Tgr7_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2339 
Symbol 
ID7318128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2462685 
End bp2464016 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content67% 
IMG OID643617239 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002514406 
Protein GI220935507 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.247119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CCATCTACGG TTCCGGTTAC GTGGGACTGG TCACTGGCGC CTGCCTGGCC 
CAGGTCGGTA ACCATGTCAT GTGTGTGGAT ATCGATCCCG CCAAGATCGA GGGCCTCAAG
CAGGGCCAGA TCCCCATCTA CGAGCCGGGC CTGGAGGACA TGGTCCTGGA CAACATCCGT
GCCGGGCGCC TGACCTTCAC CCTGGACCCC GCCGAGGGCG TCCGTCACGG CCTGTTCCAG
TTCATCGCCG TGGGCACCCC CCCGGACGAG GACGGCTCCG CCGACCTCTC CCACGTGCTC
ACCGTGGCCC GCAGCATCGC CGAGAACCTC TCCGAGTACC GCATCGTGGT GAACAAGTCC
ACGGTCCCGG TGGGCACCGC CGACCGGGTG CGCGAGACCA TCCAGAAGGT CCTGGCGGAG
CGCGGCAACG GGGGCGAATT CGACGTGGTC TCCAACCCGG AATTCCTCAA GGAAGGCGCC
GCCATCGAGG ACTTCATGAA GCCCGACCGG GTGGTGGTGG GTACCGACAA CCCCCGCACC
GCCGAGCTGA TGCGGGCCCT GTACGCCCCC TTCAACCGCA GCCATGACCG GGTCATCGTC
ATGGATGTGC GTTCCGCAGA GCTGACCAAG TACGCCGCCA ACGCCATGCT GGCCACCAAG
ATCAGCTTCA TGAACGAGCT GGCCAACCTG GCCGAGAAGC TCGGTGCCGA CATCGAGCAG
GTGCGCCAGG GCATCGGCTC CGACCCCCGC ATCGGCTACC ACTTCATCTA TCCCGGTTGC
GGCTACGGCG GCTCCTGTTT CCCCAAGGAC GTCAAGGCCC TGGAGCGCAC CGCCCGCCAG
GTGGGCTACC AGGCCAGCCT GCTGGAGGCC GTGGAGGCGG TCAACGACCG CCAGAAGGAG
CGCCTGTTCC AGAAGATCAC CCGCCACTTC GGCGAGGACC TCTCCGGCCG CACCTTCGCC
CTCTGGGGCC TGGCCTTCAA GCCCAACACC GACGACATGC GCGAGGCCTC CAGCCGGGTG
CTCATGGAGG CCCTCTGGGC CGCCGGCGCC AAGGTGCGGG CCTTCGACCC GGTGGCCGAG
GAGGAATGCG AGCGGATCTA CGGCAAGCGC GACGACCTCA CCCTGTGCGA GAGCCCTGAA
CAGGCCCTGG AGGGCGCCGA TGCCCTGGCC ATCGTCACCG AGTGGAACGT GTTCCGCAGC
CCCGACTTCG ACCAGATCCG CCAGGCCCTC AAGCAGCCCG CGATCTTCGA CGGCCGCAAC
CTCTACGATC CAGAGCACAT GGCCTCCATG GGCTTCGACT ACTACGCCAT CGGCCGCGGC
AAGACGGCGT AA
 
Protein sequence
MKVTIYGSGY VGLVTGACLA QVGNHVMCVD IDPAKIEGLK QGQIPIYEPG LEDMVLDNIR 
AGRLTFTLDP AEGVRHGLFQ FIAVGTPPDE DGSADLSHVL TVARSIAENL SEYRIVVNKS
TVPVGTADRV RETIQKVLAE RGNGGEFDVV SNPEFLKEGA AIEDFMKPDR VVVGTDNPRT
AELMRALYAP FNRSHDRVIV MDVRSAELTK YAANAMLATK ISFMNELANL AEKLGADIEQ
VRQGIGSDPR IGYHFIYPGC GYGGSCFPKD VKALERTARQ VGYQASLLEA VEAVNDRQKE
RLFQKITRHF GEDLSGRTFA LWGLAFKPNT DDMREASSRV LMEALWAAGA KVRAFDPVAE
EECERIYGKR DDLTLCESPE QALEGADALA IVTEWNVFRS PDFDQIRQAL KQPAIFDGRN
LYDPEHMASM GFDYYAIGRG KTA