Gene Tgr7_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2324 
Symbol 
ID7318109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2443066 
End bp2443710 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID643617220 
Productribosomal protein L3 
Protein accessionYP_002514391 
Protein GI220935492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000658885 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCG GATTGGTCGG TCGCAAGCTG GGCATGACCC GCGTCTTCAC GGAAGACGGT 
GCCTCCCTGC CGGTAACGGT GATCGAGGTG GACCCGAACC GCGTGACCCA GGTCAAGACC 
GAGGAGCGCG ACGGGTATCG CGCCCTGCAG GTGACCACGG GTGCCCGCAA GGCCTCCCGG 
GTGACGAAGC CCCGCGCCGG GCATTTCGCC AAGGCGGGCG TGGAAGCCGG TCGTGGCCTG 
TGGGAATTCC GTCTGGATGG TGACCAGGGT GCCGAGATCG AGACGGGTGC CGAGCTGAAG 
GTGGATATCT TCGAGGCCGG CCAGATCGTC GACGTAACGG GCATCAGCAA GGGTAAGGGC 
TTCCAGGGTG TGATCAAGCG TCACAACTTC AGCATGCAGG ATGCCACCCA CGGTAACTCC 
CTGTCCCATC GTGCCCCCGG CTCCATCGGC CAGAACCAGA CCCCGGGTCG CGTGTTCAAG 
GGCAAGAAGA TGGCCGGTCA CATGGGTAAC GAGCGTTGCA CCGTGCAGAA CCTGGAGGTG 
GTCCGGGTCG ACGTGGAGCG CAATCTTCTG CTCATCAAGG GCGCGGTGCC CGGTTCCACC 
GGCGGCAACG TCCTGGTGCG TCCCGGCGTC AAGGCTAAGG GTTAA
 
Protein sequence
MAIGLVGRKL GMTRVFTEDG ASLPVTVIEV DPNRVTQVKT EERDGYRALQ VTTGARKASR 
VTKPRAGHFA KAGVEAGRGL WEFRLDGDQG AEIETGAELK VDIFEAGQIV DVTGISKGKG 
FQGVIKRHNF SMQDATHGNS LSHRAPGSIG QNQTPGRVFK GKKMAGHMGN ERCTVQNLEV 
VRVDVERNLL LIKGAVPGST GGNVLVRPGV KAKG