| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2317 |
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| Symbol | rplP |
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| ID | 7317566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2439567 |
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| End bp | 2439980 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643617213 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_002514384 |
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| Protein GI | 220935485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0179145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCAGC CCAAGAGGAC CAAGTTCCGG AAGCAGTTCA CGGGCAAGAA CCGTGGCCTG
GCGTTCTCGG GCGGCAAGGT CAGCTTCGGT GAGTACGCCC TGCGTGCTCA GGATCGCGGC
CGACTCACTG CCCGTCAGAT CGAGGCCGCC CGACGCGCCA TGACCCGCCA CATCAAGCGT
GGCGGCAAGA TCTGGATTCG TGTGTTCCCA GACGTGCCTG TCACCAAGAA GCCCCTGGAA
GTGCGTATGG GTAAGGGTAA GGGCAACGTG GAGTACTGGG TCTGCAAGGT CCAGCCCGGC
CGAATCCTGT ATGAGATGGA AGGTGTCAGC GAGGAGATCG CCCGCGAGGC GTTCAAGCTT
GCCGCTGCCA AGCTGCCCAT CAAGACCCAG TTTGTGACCC GGACGGTGAT GTGA
|
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| Protein sequence | MLQPKRTKFR KQFTGKNRGL AFSGGKVSFG EYALRAQDRG RLTARQIEAA RRAMTRHIKR
GGKIWIRVFP DVPVTKKPLE VRMGKGKGNV EYWVCKVQPG RILYEMEGVS EEIAREAFKL
AAAKLPIKTQ FVTRTVM
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