Gene Tgr7_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2299 
Symbol 
ID7317548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2431026 
End bp2432030 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID643617195 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_002514366 
Protein GI220935467 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCA AAGTCAACGA ACTCCTCAAG CCTCGCCACA TCGAGGTCAC CAGTGTCAGC 
GATCGGCAGG CCAAGGTGGT GCTCGAGCCT CTGGAGCGCG GTTTCGGCCA TACCCTGGGC 
AATGCCCTGC GCCGTATCCT GCTGTCTTCC ATTCCGGGCG CCGCGGTGGT GGAAGCGGAG 
ATCGAGGGTG TGCTCCACGA GTACACCTCC ATCGAGGGTG TGCAGGAGGA CGTGGTCGAT 
ATCCTGCTGA ACCTCAAGGG CATCGCCCTG CGCATGCACA ACCGCGATGA GGCCACCCTG 
ACCCTGAAGA AGAAGGGCCC GGGCGTGGTC ACCGCCGGCG ACATCACCCT GGATCATGAC 
GTGGAAATCG TCAATCCGGA GCACGTGATC GCCCACCTGA CCAAGAACGG CGAGCTGTCC 
ATGAGCCTGA AGCTGGGCCG CGGCCGTGGC TACCAGCCCG TGACCGCCCG TCGCAGCTCC 
GAGTCCGAGG ACCGTCCCAT CGGTCGCCTG ATGCTGGATG CCAGCTTCAG CCCCATCCGT 
CGCGTGGCCT ACAAGGTCGA GAGCGCCCGT GTGGAGCAGC GTACCGACAT GGACCGTCTG 
GTCATCGAGC TGGAGACCAA CGGCACCGTG GAGGCCGATG ACGCCATCCG CCAGGCCGCC 
GGCATCCTGC AGAGCCAGCT GGCCGCGTTT GTCGAACTGC AGGGCGACGA GAGCACCGTC 
ACCGAGAGCA AGCAGATGGA GATCGACCCC ATCCTGCTGC GTCCCGTAGA TGACCTGGAG 
CTGACCGTGC GCTCCGCCAA CTGCCTGAAG GCCGAGAACA TCTACTACAT CGGTGACCTG 
ATCCAGCGCA CCGAGGTGGA GCTGCTCAAG ACCCCGAATC TGGGCAAGAA GTCCCTGACC 
GAGATCAAGG ACGTGCTGGC CTCCCATGGC CTTTCCATGG GCATGCGCCT TGAGAACTGG 
CCCCCGCCGG GTCTCAAGGA TCAGGACAAG AAGGCCTCCG GCTGA
 
Protein sequence
MQTKVNELLK PRHIEVTSVS DRQAKVVLEP LERGFGHTLG NALRRILLSS IPGAAVVEAE 
IEGVLHEYTS IEGVQEDVVD ILLNLKGIAL RMHNRDEATL TLKKKGPGVV TAGDITLDHD 
VEIVNPEHVI AHLTKNGELS MSLKLGRGRG YQPVTARRSS ESEDRPIGRL MLDASFSPIR 
RVAYKVESAR VEQRTDMDRL VIELETNGTV EADDAIRQAA GILQSQLAAF VELQGDESTV 
TESKQMEIDP ILLRPVDDLE LTVRSANCLK AENIYYIGDL IQRTEVELLK TPNLGKKSLT 
EIKDVLASHG LSMGMRLENW PPPGLKDQDK KASG