| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2281 |
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| Symbol | |
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| ID | 7317530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2407637 |
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| End bp | 2408989 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643617177 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002514348 |
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| Protein GI | 220935449 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCCTG ATACGCCCCA CAACAGACCA TCCACCCCCA CCGACCCGGC CGTGGAGGTG
CTGCACAAGC TGCGCGACGC CCGCGAACTG GAATCGGTCA TCCACAACCT GCCGGGCTTT
CTCTACGAAC TGCGCCAGTC CCCCAACGGC AGCTTCAGAT TCACCTACCT GAGCCGGCGG
GTGGAGGAGA TGTTCCACAT CCGGGTGGAA GACGCCCTGG CCGACGCCAA CGTGCTGCTG
GGCATGATCC ATGCCGACGA CCTGCACGTC ATCGAGGACA GCATCCGGCA CGCCCATATC
GACGGCACCT CCTGCACCGA CATGCGCATG ATCCGGCCCG ATGGCCGGAT GTTCTGGATC
GAGGCCTATG ACACCCTGCA CTTCCCGCCC GAGGGCGGCG TCATCTGGAC CGGCTATGCC
CAGGACATCA CCGAGCGCAA GCTGCTGGAA CAGGACCTGC GCCTGAGCGA GGCCAAGTTC
CGCACCCTGG TGGAGAACGC CAACGACATC ATCTACACCC TCACACCCGA GGGTGAACTG
AGCTACATCT CCCCCAACTG GCAGGACGTC CTGGGCTACG AGGTGGAGCC CTTCATCGGC
CATTCCTACG AGCCGCTGAT TCACCCCAAC GACCTGGACA GGACCCGGGA GTTCATGCGC
GCCGTGTTCA CCACCGGGAA GAAGCAGAGC GGCGTGGAAT ACCGCATCCG GCACGCCGAC
GGCAGCTGGC GCTGGCACAC CTCCAATGCC TCTCCCGTGC TGGATGAAGC CGGCCGCGTC
AGCGCCTACC TGGGCATTGC CCGGGAGATC ACCGAACGCA AGCAGCAGGA GGCGCAGATA
CACCATCTGG CCCACCACGA CCTGCTCACC GGTCTGCCCA ACCGCGCCAT GTTCTTCGAT
CGGCTGGAAG CGGCCATCGA CGAGGCCTCC GCCGAGTCCC GGAAACTGGC CCTGATGTTC
GTGGATCTGG ACCGGTTCAA GCCGGTCAAT GACCGACACG GTCACGCCGT GGGGGATCAG
TTGCTGCAGG CGGTGGCCGG GCGCATGCAC ACCATACTAC GCGCCGGCGA CCTGGTGGGG
CGCATCGGCG GCGACGAGTT CATCGTGCTG CTGCATGACA TCCGCACAGA AGACGACGCC
CTGACCGCCG CGGAAAAACT GCGCTGCCAC CTGGAGACTC CCTTCGACAT CGAGGGCCGA
CGCCTGCAAA TCTCCGCCAG CATCGGCATC GCCCTCTACC CCAGCCACGC CGACAACGCC
CGCGAACTGG CCCGGCGCGC CGACGAGGCC ATGTACCTGT CCAAGGCCGA AGGACGCAAT
CTGACGACGC TCTATTCACC CGGACGGGAT TGA
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| Protein sequence | MTPDTPHNRP STPTDPAVEV LHKLRDAREL ESVIHNLPGF LYELRQSPNG SFRFTYLSRR
VEEMFHIRVE DALADANVLL GMIHADDLHV IEDSIRHAHI DGTSCTDMRM IRPDGRMFWI
EAYDTLHFPP EGGVIWTGYA QDITERKLLE QDLRLSEAKF RTLVENANDI IYTLTPEGEL
SYISPNWQDV LGYEVEPFIG HSYEPLIHPN DLDRTREFMR AVFTTGKKQS GVEYRIRHAD
GSWRWHTSNA SPVLDEAGRV SAYLGIAREI TERKQQEAQI HHLAHHDLLT GLPNRAMFFD
RLEAAIDEAS AESRKLALMF VDLDRFKPVN DRHGHAVGDQ LLQAVAGRMH TILRAGDLVG
RIGGDEFIVL LHDIRTEDDA LTAAEKLRCH LETPFDIEGR RLQISASIGI ALYPSHADNA
RELARRADEA MYLSKAEGRN LTTLYSPGRD
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