| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2249 |
|---|
| Symbol | |
|---|
| ID | 7317498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2374228 |
|---|
| End bp | 2374929 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643617145 |
|---|
| Product | regulatory inactivation of DnaA Hda protein |
|---|
| Protein accession | YP_002514316 |
|---|
| Protein GI | 220935417 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGC GCCAGCTGAC CCTGGACGTG ACCCTGCCGG ACGGGTCCGA TTTCGATGCT
TTCCACGCGG GTGCCAACGG CCTGGCCCTG GACAGCCTGC GCGCCCTGGC CCGGGGCGAG
GGGGAGCGCC AGCTCTATCT CTACGGCGAG CCCGGCAGCG GCAAGACCCA CCTGCTGCAG
GCCGCCTGTC ACGAGGCATC GCTATGGGGG CGCCGCGCCG CCTACCTCCC CGCCTTCCTG
CTGCGCCAGG GTGGCGCACA CGCACTGGAA GGTCTGGATC AGCTGGATCT GGTCTGCCTG
GATGGCATCA GTGCGCTAGT CGGGTGTGTG GAGACCGAGA CGGGCCTGTT CAACCTCATC
AACGCCTCGA GGTGCCGCGA TACCCGGCTG GTGCTTGCCG ATACCCATGC CCCGCGGGCC
CTGTCGGCGG CGCTTCCCGA CCTGGGCTCA CGCCTGGTCT GGGGTCCGGT GTTCCAGCTA
CAGCCTCTGG ATGATGCCGG CAAGCGAGCC GTGCTCGTGG AACGCGCCCG GCGCCGCGGC
TTCGATCTAC CCGGGGAGGT GGGGGAGTTT CTGCTGCGCA CCTGTGCCCG TGATCTTGCC
ACGCTCATGG TGCAACTGGA GCGTCTGGAA CAGGCGTCCC TGCGGGATCA GCGCCGGGTG
ACCCTGCCGT TCGCCCGGGC GGTTCTGGGG GAGGGGGGGT GA
|
|---|
| Protein sequence | MQARQLTLDV TLPDGSDFDA FHAGANGLAL DSLRALARGE GERQLYLYGE PGSGKTHLLQ
AACHEASLWG RRAAYLPAFL LRQGGAHALE GLDQLDLVCL DGISALVGCV ETETGLFNLI
NASRCRDTRL VLADTHAPRA LSAALPDLGS RLVWGPVFQL QPLDDAGKRA VLVERARRRG
FDLPGEVGEF LLRTCARDLA TLMVQLERLE QASLRDQRRV TLPFARAVLG EGG
|
|---|
| |