| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2203 |
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| Symbol | |
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| ID | 7317450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2332579 |
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| End bp | 2333847 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643617098 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_002514270 |
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| Protein GI | 220935371 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.92236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCAGT CCATCCGGCG CTCCGGCGTC TTCATCTGCC TGGCCTCCGG CCTCGCCGCC
ACGGGCGTTG CCCAGGCCAC CAACGGCTAC CAGCTCATCG GCATCGGTGC CTACCAGAAG
AGCCTCGGTG GCGCGGTGAC CGCCAACCCC GGCTCTGCCA TGACCGCCAT CACCAACCCC
GCCGGCATGG CCCGCATCGG CAAGCGCGCG GACTTCTCCA TGGAGGCCTT CATGCCAGAG
CGCTCTGTGG ATTTCACCGC CACGGGCGGC GAGACCGGCA AGAGTTCCGT GGACCTGTAC
GGGATCCCGG CCATCGGCTG GACCGCACCG GTCAACGGGC GGGATGACCT GTGGTTCGGC
GGCGGCATGT ACGGCACATC GGGCATGGGT GTGGACTATG CGCAAACCGA GGTCATGCCC
GGTCTGTCAT TCGATGGTTA CAGCAACGTC ATGCTTTGGC AGATGGCACC GACCCTGGCC
TGGCAGGTGG ATGATCGCCT CACCCTCGGC GCCTCGCTCA ACATCAATTA CCAGTCCGTG
GCGTTCAAGC AGCGCTTCAT CAATGCACTG GGTGATGTGG AGAACAATTT TGACCTGTCA
CGCTCTTCCA GTGCCTTTGG CATTGGGGCG TCCTTCGGTC TGCTGTTCGA TGTGAACGAC
CGTCTCACTC TGGGCGCTGC CTACAAGAGC AAGCAGGTGT TCGGGGATCA TGCGTACAAC
CTGGCCCAGG GCGACATCGA CATGAGCATG ATGGGCGGTG GACCGTTGCC CGCCGGCACC
TACAAGCTGG GCCTGGATTT TCCCCAGCAG CTGGCTCTGG GTCTTGCCTA CCGCGCCATA
CCGGCCGTGA CTGTCTCCGC TGACGTGAAG TGGATCAACT GGTCCGACAC CATGGACAAG
CTGGCTGTGA CCGGTCCCGG CGGAATCTCC GTGCCCATGG ATCCGGGCTG GGACGACCAG
ACCGTCTACG CCCTGGGCGT GGACTGGGCC GTGAACAACC GCCTCAACCT GCGGGCCGGT
TTCAACTACG GCAAGTCACC CATCGGCAAC GAGGACGTCA GCCGCAACCT GATCCTGCCG
GCCGTGGTGG AGACCCACTA CACACTGGGT GCCGGCTATA ACATGGACGG CAACTGGGAA
CTGGCCTTCC ACTACATGTA CGTGCCCGAG AAGACCTTCC AGGCGCCGGC CACGGATCCC
ATGCTGCCTG GCAGCAAGAT CTCCCTGTCC GAGCAGTCCT TCGGCGTGAA CCTGGGCTAT
CGCTTCTGA
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| Protein sequence | MYQSIRRSGV FICLASGLAA TGVAQATNGY QLIGIGAYQK SLGGAVTANP GSAMTAITNP
AGMARIGKRA DFSMEAFMPE RSVDFTATGG ETGKSSVDLY GIPAIGWTAP VNGRDDLWFG
GGMYGTSGMG VDYAQTEVMP GLSFDGYSNV MLWQMAPTLA WQVDDRLTLG ASLNINYQSV
AFKQRFINAL GDVENNFDLS RSSSAFGIGA SFGLLFDVND RLTLGAAYKS KQVFGDHAYN
LAQGDIDMSM MGGGPLPAGT YKLGLDFPQQ LALGLAYRAI PAVTVSADVK WINWSDTMDK
LAVTGPGGIS VPMDPGWDDQ TVYALGVDWA VNNRLNLRAG FNYGKSPIGN EDVSRNLILP
AVVETHYTLG AGYNMDGNWE LAFHYMYVPE KTFQAPATDP MLPGSKISLS EQSFGVNLGY
RF
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