| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2127 |
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| Symbol | |
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| ID | 7318231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2258599 |
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| End bp | 2259525 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643617022 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_002514194 |
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| Protein GI | 220935295 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.518947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGCTT TCACTACCGG CCCGGACACT GCCCCGCCTT CCACCCTGGC TATCGACGCC
TTCCTCGACG CCATCTGGGC GGAGCACGGC CTGAGCGATC ACACCCTGGC CGCCTACCGG
GCGGATCTCA TGGCACTGGC CCGCTGGCTG GGGCCCCGGG GCAAACGGGT GGAGCAGGCG
GACCGTGGCG ACCTGCTGGC CTACCTGTCA CACCGGGTGG CCGGTGGTGC CCGGCCCCGG
TCCACCGCGC GTCTGCTGTC CAGTCTGAGG CGTTTCTACC GCCACCAGGT GCGCGACGGG
CGGCGCCAGG ACGATCCCAC CGCCCAGATC GATTCCCCCA AGCTGGGCCG GCCCCTGCCG
GACACCCTGA GCGAGACGGA CGTGGAGGCC CTGCTGGCAT CCCCGGACAC CGACACCGAC
CTGGGGCTGC GCGACCGGGC CATGCTGGAA CTGCTCTACG CCACCGGGCT TCGGGTCTCG
GAGCTGGTGG GGCTTCGGGT GGACCAGGTG AACCTGCGCC ACGGGGTGGT GCGCACCCTG
GGCAAGGGCA GCAAGGAGCG CCTGGTGCCC CTGGGCGAGG AGGCCTCCGT CTGGGTGGAG
CGTTACCTCG GTGCTGCCCG CCCGGCGCTG CTGGCGGGGC AGGGGGCCTG CGACGACCTG
TTCGTCACCC GCCGGGGCGG GGCCATGACC CGTCAGGCCT TCTGGCACCT GCTGCGCCGC
TATGCCGCCC AGGCCGGCAT TCACAAGCAT CTCTCGCCCC ACACCCTGCG TCATGCCTTC
GCCACCCACC TGCTCAACCA CGGCGCCGAC CTGCGCGTGG TGCAGATGCT GCTGGGCCAC
AGCGACCTGT CCACCACCCA GATCTACACC CACGTGGCCC GGGCAAGACT CAAGGAGCTG
CACGGCAAAC ACCACCCGAG AGGGTAA
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| Protein sequence | MSAFTTGPDT APPSTLAIDA FLDAIWAEHG LSDHTLAAYR ADLMALARWL GPRGKRVEQA
DRGDLLAYLS HRVAGGARPR STARLLSSLR RFYRHQVRDG RRQDDPTAQI DSPKLGRPLP
DTLSETDVEA LLASPDTDTD LGLRDRAMLE LLYATGLRVS ELVGLRVDQV NLRHGVVRTL
GKGSKERLVP LGEEASVWVE RYLGAARPAL LAGQGACDDL FVTRRGGAMT RQAFWHLLRR
YAAQAGIHKH LSPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVARARLKEL
HGKHHPRG
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