| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2124 |
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| Symbol | |
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| ID | 7318228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2253159 |
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| End bp | 2256602 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643617019 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002514191 |
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| Protein GI | 220935292 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTTG TATCTAGCCA CTTGTCTCTA GCGCTGTCCT TCATGCTCGC CACCGACCCC
AGCCTCAACA TCTCCGTCTT CGCCTCCGCC GGCTCCGGCA AGACCTACCT GCTGGTCACC
CGCATCCTGC GCCTGCTGCT GGCCGGGGCC CGGCCCGACG GCATCCTGGC GGTGACCTTC
ACCCGGCTCG CGGCCGGCGA GATGCAGAGC CGGCTCACGG AACGGCTGCG GGAATGGCAG
ACGCTGGACG ACACGGCCCT GGACCGGGCA CTGGCGGACA TGGGGGTGAG CGTCGACGAT
GCCGTGCGGG AACGGGCCCG GCGGCTGTTC GAGCAGACCC TGCTGGCGGA CCGCCCGGTG
CGTGCCACCA CCTTCCACGC CTTCTGCCAG GACCTGCTGG CCCGCTTCCC CCTGGAGGCC
CGGGTGCCGC CCGGGTTTGA ACTGGCGGAC AATGAGCGGG AGTTGCAGGA CCGGGCCTGG
GACGCCCTGG TGAGCGAGGC CACCCGGGCG CCGGACGCCA CGGTGGCCAG GGCCCTGGAG
ACGCTCATCG CCACACTCAA TAGCGTGGAC AGCGTGCGCA AGGCACTGGA CGGATTCCTG
TCCCACCGGG AGGACTGGTG GGCCTGGACG GAACACGAGG CCGATCCCCT CGCCTTCGCC
CGGGCACGCA TCACCGAGGC CCTGGCGGTG GACCCGGACG CCGACCCCCG GGGCGACTGC
CTGGACCCGG CCACGCGCGC AGACCTGACC GATCTAGCCG CGCTGCTGGC ACGCAACACC
AGCACCGACA AGCCCCTGGG ACAGGCCCTG GCCGATGCCC TGGCCATCGG GGACACCGGT
GTCCTGTTCG AGGCCGCCCG GGCCGCCCTG CTCACCCAGA AAAACACCCC CCGGGTCCGC
AAGCAGAGCG CGGCCCAGGC CAAGCGTCTG GGCGGCGAGG CCGCCGAGGA CCGCTTGCTG
GCCCTGCACG GCACACTCTG CGAGCGCTGG CTCGCGGCCC TGGACGGGCT CGCCCGCCAG
CACAGCCTGC GCCTCAACGG CGCCTGGTTC AGTGCCGGCC TGCGCTACCT GGAACACTAC
CAGGCCCTCA AGGAGGAGCT GCGCACCCTG GACTTCACCG ACCTGGAGTG GCGCGCCTAC
CAACTGCTCA ACCACGGCGA CCACGCCCTG TGGGTGCAGT ACCGCCTGGA CAGCCGCATC
GAGCACCTGC TCATCGACGA GTTCCAGGAC ACCAACCCCA CCCAGTGGCG CCTGATCCTG
CCCCTGCTGG AGGAACTGGC CGCCCACGGG GAACGCCAGG GGCGCAGCGT GTTCCTGGTG
GGCGACACCA AGCAGTCCAT CTACAGCTTC CGCCGCGCCG ACCCCCGTCT GCAGGAGATC
GCCGCCCGCT GGATCGAGGA GCGGCTGAAC GGCCGGCCCG AGACCCTGGA CTGGTCCTGG
CGCTCGAGCC CCGCGGTGAT GGACTTCGTC AACCGGGTGT TCACCGCCTG CCCCGCCCTG
CGCGCGGCCC TGCCCGGCTT CCACCCCCAC GACACGCACC TCAAGGACCT GTGGGGCCGG
GTGGAGGTCT GGCCGCTGAT CCAGGCGGAC CAGGAAACCG AGGAGGACAC GCCGGCATCC
CAGGGCCTTC GCGACCCGCT CACCACCCCC CGACCCGACC CGGGCGAAAG CCTGCACGCC
CGGGAGGGGG CGCGCATCGC CGCGCGCATC CGGGAGATGG TCGACGGCGG ACAGGTGGTG
GGCCGGGGCG CATCAGCCCG GCCAATGCAT TTCGGCGACA TCACCATCCT GGTACGCAAC
CGCACCCACG TGGGCGCCAT CGAGGACGCC CTGCGAGATG CGGGTATCCC CTACCTGAGC
GCCGCCCGGG GCGAACTGCT GGATCACCTG GAGGTGCGCG ACCTGGAGGC CCTGCTGCGG
GTGCTCATCA CCCCCCACGA CGATCTCGCC CTGGCCCAGG TGCTGCGCTC GCCCCTGTTC
GACGTGACGC ACCGGGAACT GGAGCGCCTG GCGGATGCCG GACCCGGCCC CTGGCACGAG
CGCCTGGAGC GGCTGGCCCC GGACCTGCCG CCCGGCAGCG CCCTGAAACG GGCGGCCGAC
AAACTCACCC GATGGCGGGC ATGGAGCGGC GCCCTGCCCG TGCACGACCT GCTGGACCGC
ATCTTCCTGG ACGGCAATGT GCTCGCCCGT TACCAGGCCG GCAGCCGGGC GGACCGGGTG
CCCACGGTGA TGGCGAGCCT GATCCGCTTC CTGGAACTGG CCCTGGAGGT GGACAGCGGC
CGCTACCCCA GCCTGGTGCA TTTCCTGGCC CGGCTGCGGG GCCTGCGTGA CCGGTCGGAC
GCCGCCCCCG ACACCCCGCC GGTGCGCGGC GCCGAGCAGC GGGTACGCAT CATGACCATC
CACGCCTCAA AGGGCCTGGA GGCCCCGGTG ATATTCCTGG CCGATGCCGC CGCCGTGCCC
AGGGACCACA AGACCTACGA ACCCCTGGTG CAATGGCCCG CCGGGGAACC CCGCCCCCGG
CTCATGCAAC TGCTGCCCAG GAGCGATGAC GTGGACAGCC TCACCCGGCA GGCCCTGGCG
CATCACCAGA CCGCCCGTGA GCGGGAGGAG GCCAACCTGC TCTACGTGGC CCTGACCCGG
GCCCGGCAGG TCCTGATCGT CAGCGCCAGC GCCCGCGGCA AGGGTGACGG CGGCTGGTAC
GCCCGCATTC GCGAGGCCAT CGCCCCGGAG GCGGTCAGCG AAGAGCTGGA TACGGGTGTG
CCCGGCCGCT TCGCGGAGGA CGGCAGCTGG GTGCACGAGG CCGGCACGCC GCCCGTGGCC
GCAGAGCAGG CTGTCGCGAC ACCGCCGGCG GCGCAGGTCC CCGAGGGCCT CAACCGGCGC
CTGGAGTGCG CCGCGCCGGA ACGGGAGATC GCCCCCAGCC GGGCGGCCGC GGGCTATGCC
GAGGGGGAGC GGGAGGATGG CGACGAGGAC GCCCGCCTGC GGGGCGTGGG CATTCACCGC
CTGCTGGAAT GGCTGGCAGG AGGCATGCGG GACAGCGACG CGGCCCTGAT CCGGCGCCTG
GCCGCCGAAC TGGGCCTGGA CCCCGGCCAT CCCGATCTGG GGGAATGGCT TGGCGAGGCC
CGCGCGGTGC TGGCCGAGCC CGGCCTCGCG GCGGTGTTCG CCCCAGCGCC CGACTGTGTG
GATTACTGCG AGGTTCCCCT GCAGTACACC GCCGCCGACG GACGCACCGT GTATGGCATC
ATCGATCGTC TGCGGGTCGG CCGCGAGCGC ATCCTGCTCG TCGACTACAA GACCCACCGG
GTGGCCGACG AGGCCGCCGC CCGGCAGGTG GCCGAGGTCT ATGCCGCCCC CATGGCGCTG
TACGCCGAGG GCGTGCGCAG GCTCTGGCCC GGCAGGACGG TGGAGGCCCG GCTGCTGTTC
ACCCACCTGC GGGCGCTCGT ATGA
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| Protein sequence | MYLVSSHLSL ALSFMLATDP SLNISVFASA GSGKTYLLVT RILRLLLAGA RPDGILAVTF
TRLAAGEMQS RLTERLREWQ TLDDTALDRA LADMGVSVDD AVRERARRLF EQTLLADRPV
RATTFHAFCQ DLLARFPLEA RVPPGFELAD NERELQDRAW DALVSEATRA PDATVARALE
TLIATLNSVD SVRKALDGFL SHREDWWAWT EHEADPLAFA RARITEALAV DPDADPRGDC
LDPATRADLT DLAALLARNT STDKPLGQAL ADALAIGDTG VLFEAARAAL LTQKNTPRVR
KQSAAQAKRL GGEAAEDRLL ALHGTLCERW LAALDGLARQ HSLRLNGAWF SAGLRYLEHY
QALKEELRTL DFTDLEWRAY QLLNHGDHAL WVQYRLDSRI EHLLIDEFQD TNPTQWRLIL
PLLEELAAHG ERQGRSVFLV GDTKQSIYSF RRADPRLQEI AARWIEERLN GRPETLDWSW
RSSPAVMDFV NRVFTACPAL RAALPGFHPH DTHLKDLWGR VEVWPLIQAD QETEEDTPAS
QGLRDPLTTP RPDPGESLHA REGARIAARI REMVDGGQVV GRGASARPMH FGDITILVRN
RTHVGAIEDA LRDAGIPYLS AARGELLDHL EVRDLEALLR VLITPHDDLA LAQVLRSPLF
DVTHRELERL ADAGPGPWHE RLERLAPDLP PGSALKRAAD KLTRWRAWSG ALPVHDLLDR
IFLDGNVLAR YQAGSRADRV PTVMASLIRF LELALEVDSG RYPSLVHFLA RLRGLRDRSD
AAPDTPPVRG AEQRVRIMTI HASKGLEAPV IFLADAAAVP RDHKTYEPLV QWPAGEPRPR
LMQLLPRSDD VDSLTRQALA HHQTAREREE ANLLYVALTR ARQVLIVSAS ARGKGDGGWY
ARIREAIAPE AVSEELDTGV PGRFAEDGSW VHEAGTPPVA AEQAVATPPA AQVPEGLNRR
LECAAPEREI APSRAAAGYA EGEREDGDED ARLRGVGIHR LLEWLAGGMR DSDAALIRRL
AAELGLDPGH PDLGEWLGEA RAVLAEPGLA AVFAPAPDCV DYCEVPLQYT AADGRTVYGI
IDRLRVGRER ILLVDYKTHR VADEAAARQV AEVYAAPMAL YAEGVRRLWP GRTVEARLLF
THLRALV
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