Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2084 |
Symbol | |
ID | 7318187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2212485 |
End bp | 2212892 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643616978 |
Product | PilT protein-like protein |
Protein accession | YP_002514151 |
Protein GI | 220935252 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.236876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATCTGC TGGATACGGT TGTCCTGTCC GAGTTGCGCC GCAAGGAAAG AGACCCGGGG GTTGTCGACT GGGTGGCCGC ACAGCGTTCC ACAGATCTTT TCCTGAGCGT TGTGACCATC GGGGAGGTCG AGCGCGGTAT CATGCGTCAG CAGACAAAGA ATGCGGTGTT CGCTTCTGCT TTGGCAGAGT GGCTGGACAT TGTTCTGAAG TTCTACTCGG ACCGGATTCT GCCTGTTGAC ACAGCGGTGG CCCGTCGTTG GGGCCGGCTC TCCGCGGAGC TGGGCAATGA CGGAGCTGAA TTGCTGATCA GCGCTACTGC GCATGAATAT GGCCTAACCG TAGTGACTCG AAATGTTCGC CACTTTGAGC CAACTGGCGT TCAGGTGGTA AACCCATTTT CGGTCTGA
|
Protein sequence | MYLLDTVVLS ELRRKERDPG VVDWVAAQRS TDLFLSVVTI GEVERGIMRQ QTKNAVFASA LAEWLDIVLK FYSDRILPVD TAVARRWGRL SAELGNDGAE LLISATAHEY GLTVVTRNVR HFEPTGVQVV NPFSV
|
| |