| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2083 |
|---|
| Symbol | |
|---|
| ID | 7318186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2210958 |
|---|
| End bp | 2212376 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643616977 |
|---|
| Product | Undecaprenyl-phosphate galactose phosphotransferase |
|---|
| Protein accession | YP_002514150 |
|---|
| Protein GI | 220935251 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCCA GGCGCTCCGG TGGTGTGCTC AAGGAGCATG CCGGGTTCCT TAATGTCACC
CTTCATGTGA TCGACTGGTT TATTGTCGCA TTCTGTGGCT GGTTATCACA TTGGCTGTAT
TTGGGAGTTC CTTCCCTAGA CGATCATTAT GAAGCGGCAT TGCTTATCGG TGCGCTGCTC
GCTGCGCTCG TATTTCAGCG ATTTAACCTC TATCGCCCCT GGAGGGGAGC CTCCCTCTGG
GAAGAGTTGC GACTTATCAC CGCGGCCTGG GTCTTTGTCT TCACAGCCTT GGTCGCGATC
GCCTTTTTTA CCAAGATGGG TGAGAGCTAT TCCCGTGGTT GGGCCTTGAT CTGGGCGACG
AGTACGTGGT TTGTCTTGCT CGCGAGTCGG TTCATCCTTA GGAATATTTT GAACAGCTTG
CGTGCTCGTG GTTACAACTA TCGGCGCATC GTCATCGTCG GCGCAACGGG AGCCGGTAGG
CAGGTTGCCG AGCGTATCAA GGCAGCGCCA TGGCTTGGCC TCAAAATCAT CGGGTTCTTC
TGTGATCGAG AGGGTCTCAA GGGCACCTCA CCTTGTGGCT ACCCCATGTT GGGCAGGGTT
TCAGAACTGG CCGAATTCGT TCGAAAAGAA GATGTCGACC AGATCTGGAT TGCGATGCCT
TTGCAAGAGG CAGACCGTCT TCAGGATGTA TTACATTCAT TGCGCAATGA AACCGTTGAT
ATCCGATTCG TGCCGGATCT GTTTGGTCTC CGTCTCTTGA ATCATTCAGT CACAGACGTA
GCTGGCCTGC CCGTCATGAA TCTCTCGGTT TCCCCCATGG AGGGGGTAAA CAGATTCGTC
AAGGCCATTG AAGACAGGGT GCTCTCGCTG TTGATCCTGA TTCTGATCAG CCCCTTGCTG
GTCGCAATTG CCATCGGCGT GAAGCTCAGT TCGCCGGGGC CTGTGTTGTT CAAGCAGAAA
CGCCATGGCT GGGACGGCCG TGAGATCAGG GTGTATAAAT TCCGCAGCAT GGTGTTGCAC
CAGGAGGCGG ATGGGCAGGT CACCCAGGCG TCCAAGGCGG ATCCTCGGGT TACGCGCTTC
GGGGCCTTCT TGCGACGGAC CAGCCTGGAT GAGTTACCCC AGTTCTTTAA TGTGCTCCAG
GGCCGGATGT CGATTGTCGG GCCCCGTCCC CATGCGCTCG CACATAACGA GTACTACAAG
GAGCATATTG ATTACTACAT GCTTCGGCAC AAGGTGAAGC CCGGCATTAC AGGGTGGGCT
CAGGTCAACG GCTACCGTGG TGAGACGGAT ACGCTGGAGA AGATGCAGAA GCGGGTGGAG
TATGACCTGT ATTACATCGA GAACTGGTCG TTGTGGTTTG ATTTGAAGAT CATTTTTTTG
ACGGTTTTTA AGGGGTTTGT GGGGAGGAAT GCATATTGA
|
|---|
| Protein sequence | MSPRRSGGVL KEHAGFLNVT LHVIDWFIVA FCGWLSHWLY LGVPSLDDHY EAALLIGALL
AALVFQRFNL YRPWRGASLW EELRLITAAW VFVFTALVAI AFFTKMGESY SRGWALIWAT
STWFVLLASR FILRNILNSL RARGYNYRRI VIVGATGAGR QVAERIKAAP WLGLKIIGFF
CDREGLKGTS PCGYPMLGRV SELAEFVRKE DVDQIWIAMP LQEADRLQDV LHSLRNETVD
IRFVPDLFGL RLLNHSVTDV AGLPVMNLSV SPMEGVNRFV KAIEDRVLSL LILILISPLL
VAIAIGVKLS SPGPVLFKQK RHGWDGREIR VYKFRSMVLH QEADGQVTQA SKADPRVTRF
GAFLRRTSLD ELPQFFNVLQ GRMSIVGPRP HALAHNEYYK EHIDYYMLRH KVKPGITGWA
QVNGYRGETD TLEKMQKRVE YDLYYIENWS LWFDLKIIFL TVFKGFVGRN AY
|
|---|
| |