Gene Tgr7_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2016 
Symbol 
ID7316405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2139434 
End bp2140117 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID643616908 
Productpeptidase M50 
Protein accessionYP_002514083 
Protein GI220935184 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0347485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACA TCATCCAGAC CATCGCCATC TGGGCGATTC CCGTGCTGTT CGCCATCACC 
CTCCACGAGG TGGCCCATGG CTGGGTCGCC AAGCTGCTGG GCGACACCAC CGCCCAGATG 
CTCGGGCGGC TCACGGTCAA TCCCTTGAAA CACATCGACC CGGTGGGCAC GGTGCTGGTG 
CCCGTGGGGC TTTTGATCTT CTCCGCCATG ACCCCGGGGC CGCCGTTCGT GTTCGGCTGG 
GCCAAGCCGG TGCCGGTGAA CAGCCGCAAC CTGTCCCGGC CCCAGCGGGA CATGGCGATC 
GTGGCGGCGG CCGGGCCCAT GGCCAATCTC ATCATGGCCC TGTTCTGGGC GCTGATGATC 
AAGCTCGGCT TCAGCCTCAT GGGCAGCTTC GACTGGGTGG CGGTGCCCCT GGTCTACATG 
GGCATCGCCG GCATCGCCAT CAACATCCTG CTCATGGTGC TCAACCTGCT GCCCGTGCCG 
CCCCTGGACG GCGGGCGGGT GGTGTCCGGT TTCCTGCCGC CGCGCATGGC CGCCACCTAC 
GACCGCATCG AGCCCTTCGG CCTGTTCATC GTCCTGGGCC TGCTGGCCAC TGGGATGCTG 
GGCGCCATCA TCGGGCCCTT CTACGGCTTC TTCGTGGAAC TCATCGAGAG TCTCTTCGGG 
CTGCCCTTCC ACAAGCTTCG CTGA
 
Protein sequence
MDNIIQTIAI WAIPVLFAIT LHEVAHGWVA KLLGDTTAQM LGRLTVNPLK HIDPVGTVLV 
PVGLLIFSAM TPGPPFVFGW AKPVPVNSRN LSRPQRDMAI VAAAGPMANL IMALFWALMI 
KLGFSLMGSF DWVAVPLVYM GIAGIAINIL LMVLNLLPVP PLDGGRVVSG FLPPRMAATY 
DRIEPFGLFI VLGLLATGML GAIIGPFYGF FVELIESLFG LPFHKLR