Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2009 |
Symbol | |
ID | 7316398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2132649 |
End bp | 2133302 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643616901 |
Product | HhH-GPD family protein |
Protein accession | YP_002514076 |
Protein GI | 220935177 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.483803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGGTC AGCGATTGCG CAAGGTGTAC CAGTTGTTGT TTGAGGCCCA CGGCCCCCAA CACTGGTGGC CGGCGAACAG TGGCTTCGAG GTGATGGTCG GGGCGGTGCT GACCCAGAAC ACCGCCTGGC GCAACGTGGA ACGGGCCATC GCCGCGCTGA AGGCAGCGAA TGCACTCTCG CCCGAGGCCA TGCTGGACCT CTCCGATGCC GAGCTGGCCC GGCTTATCCG TCCTTCCGGT TACTTCAACG TCAAGGCCCG CCGGCTCAAG GCCCTGTGCC GCTGGTACCT GGACCACGGC GGACGGCGGC GCCTGCGCCA CTGGCCCACG GAGAAGCTGC GGGCATCCCT GCTGTCGGTG CATGGCATCG GCCCCGAGAC CGCCGACGAT ATCCTGCTCT ACGCCTTCGA TCGTCCCGTG TTCGTCATCG ATGCCTACAC GCGCCGGCTG CTCGGCCGGC TGGGTCATCC CCATGCGCAG GCAGCCTACG ACGATTTCAG GATGTCACTG GAATCGACAC TGGGGCAGGA CGAACGACTG TATAACGAAT ACCACGCCCT GATCGTCGCC CATGGCAAGG ACGTGTGCAG GCCGAAGCCG CGCTGTGAGC AATGCGTTTT AAGTACGAAG TGTGAATTTG GAAGTGGGAC ATGA
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Protein sequence | MNGQRLRKVY QLLFEAHGPQ HWWPANSGFE VMVGAVLTQN TAWRNVERAI AALKAANALS PEAMLDLSDA ELARLIRPSG YFNVKARRLK ALCRWYLDHG GRRRLRHWPT EKLRASLLSV HGIGPETADD ILLYAFDRPV FVIDAYTRRL LGRLGHPHAQ AAYDDFRMSL ESTLGQDERL YNEYHALIVA HGKDVCRPKP RCEQCVLSTK CEFGSGT
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