| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2003 |
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| Symbol | |
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| ID | 7316392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2125329 |
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| End bp | 2125946 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616895 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_002514070 |
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| Protein GI | 220935171 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCCGAT ACCTGCTCGC ATCCCTGCTG GCGCTTACGC TCGCCACCCC GGCCTTCGCC
GCCGACGCCC GCCAGAGCCT GGAGCGCTTC TTCAGTGAGG TGAGCCGCTT TGATGCCCGC
TTCGAGCAGC TGGTGATCAA CGAGCAGGAC GAGGTCCTGC AGGCCTCCGA GGGCCGCGTG
CAACTGCAGC GTCCGGGCCG GTTCCGCTGG GATTACGAGC AGCCCTTCCG CCAGCTGATC
ATCGCCGACG GCCAGTTCCT GTGGACCTAC GACGAGGAGC TGGCCCAGGC CACCGCCCAG
CCCATGGAAC GGGTGCTGGC CGGCGCCCCC ATCATGCTGC TCTCCGAACC CCGCCCCCTG
GAGCAGGACT TCGAGGTGAG CGTGGTGGGC GAGCGCGGCG AACTGAACTG GGTGGAGCTG
ACCCCCAGGG ATCGCGATGC GGACTTCACT CGCATCCTCA TCGGCATGGA CGGTGACCGG
GTGGGCATGA TGGTGCTCTA TGACCAGTTC GGCCAGCAGA CCCGCATCCG CTTCTCCAAC
ATGCGCATCA ATCCCAGCAT CCCCGCCGCC ACCTTCCGTT TCGAGGCGCC GCCGGGGGTG
GATGTGATCA GGCATTGA
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| Protein sequence | MFRYLLASLL ALTLATPAFA ADARQSLERF FSEVSRFDAR FEQLVINEQD EVLQASEGRV
QLQRPGRFRW DYEQPFRQLI IADGQFLWTY DEELAQATAQ PMERVLAGAP IMLLSEPRPL
EQDFEVSVVG ERGELNWVEL TPRDRDADFT RILIGMDGDR VGMMVLYDQF GQQTRIRFSN
MRINPSIPAA TFRFEAPPGV DVIRH
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