Gene Tgr7_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1970 
Symbol 
ID7316359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2091680 
End bp2091997 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content61% 
IMG OID643616863 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_002514038 
Protein GI220935139 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TGCAGATCAA CCAGGTGCTC GCCCAGATGC GGGCGCTGGC GGCGAACTCC 
GGTCTCAACG CCACGCCCGC CCAGGAACCG TCCGGGGTCA ACTTCGCCCA GATGCTCAAG
CAGAGTCTGG ACCAGGTGAA CCAGACACAG CAGGCCGCCA GCGAGTTGAG GAACGCCTTC
GAACTGGGCG ACCCCAACGT GAACCTGGCC CAGGTGATGG TGGCCATGCA GAAATCCAGT
ATTTCCTTCG AGGCAGTCAA CCAGGTGCGC AACCGCCTGC TCAACGCCTA CCAGGAAATC
ATGAGAATGC CGCTCTGA
 
Protein sequence
MSDMQINQVL AQMRALAANS GLNATPAQEP SGVNFAQMLK QSLDQVNQTQ QAASELRNAF 
ELGDPNVNLA QVMVAMQKSS ISFEAVNQVR NRLLNAYQEI MRMPL