| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1969 |
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| Symbol | |
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| ID | 7316358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2090001 |
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| End bp | 2091659 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616862 |
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| Product | flagellar FliF M-ring protein |
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| Protein accession | YP_002514037 |
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| Protein GI | 220935138 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATT CGATGGCGGT TCTCAGCAAT CAGGTGCGGG GCTTCGGCAG GCTGCCCATG
GAGCGCCAGA TCGGCCTGAT CGTGGCGCTG GCGGCGGCGG TGGCGCTGGT GTCGAGCCTC
TTCATGTGGA TGACGCGCCC CAGCTACACG GTGCTGTATC CCAACCTGGC GGAGCAGGAG
AGCGGCCAGG TCGCCGAGGC CCTGGGGCGG CACAACATTC CCTACCGCCT GGATTCCGCC
ACCGGCGCGG TCACCGTGCC TGCCCGCCAT CTGCACGACG CCCGCCTGAA GCTGGCCACC
GAGGGGCTGC CCAGGGCTAC CGGTTTCGGC TTCGAGCTGC TGGAGCAGGA CCAGGGTCTG
GGCACCAGCC GCCTGATCGA GAACGCCCGT TACCATCGCG CCATCGAGGG CGAACTGGCC
CGCTCCATCG CCACCCTGAG CAGCGTGGAG AGCGCCCGGG TGCACCTGGC CCTGCCTGCT
CAGTCGGTAT TCGTGCGTGA CCGGAGCAAG CCGAGCGCCT CGGTGCTGGT CAATCTCTAC
GCCGGGCGGA CCCTGGACGA GAGCCGCATC GCGGGCATCG TGCACCTGGT GGCCTCCAGC
GTGCCGGACC TGGAGCCGGA GCGGGTCACG GTGGTGGACC AGCGTGGCCG ACTGCTGACC
CAGCCGGCCG GAGACGTGGA CGGCGTCATG GCCAGCACCC AGCAGCTGGA TTTCACCCGC
CGCATGGAGG AAAGCTACGT GCGGCGCATC ATGGACATCC TGACGCCCAT CCTGGGCGCC
GACGCGGTCC GCGCCCAGGT GGCCGCGGAC CTGGATTTCT CGCGCATCGA ACGCACCACC
GAGGCCTTCG ATCCGGAATT CTCCGTGGTG CGCAGTGAGC AGATCTCCGA GGACGAGAGC
CGCGGCGGCG GCATGATGGG CGTGCCCGGC GCGCTCACCA ACCAGCCCCC CGAGGCGGGC
GTGATCGCCG AGGAAGGCAA CGGTGCCAAC GGCCAGGCCC AGGTGCCTGG CTCCAGCAGC
CGCCGCACGG TGCGTAATTA CGAGGTGGAT CGTACCGTCA GCCACATCCG CGAGGCCCCC
GGAGGTCTGC GCCGCCTGTC CATTGCGGTG GTGGTGGACC ACAAGGAAGA ACGCAACGAG
GCTGGAGAAC TTGAACGGGT GCCGTTCACT GAACAGGAGA TGGAGCGTAT CACCACCCTG
GTGCGCGAGG CGGTGGGTTT CGACGCCCGC CGCGGCGACA GCATCAACGT GATCAATGCC
TCGTTCCGAC CGGTGGAGGC ACTGGAACTG CCGCCCGAAC CGCCCATCTG GCAGGAACCC
TGGGTGGTGG ATCTCGCCAA GACTATACTG GCGGTGATCA TGGTCATCGT GCTGGCCCTG
ACCGTGGTGC GGCCCCTGCT CAAGGGGTTG GCGGAGCGGG GTGCCGCGGC GCGCCGCGAG
GATCAGCTGG GCCACCTGGC CCTGCCCGAA GGCGAGCTGG GCGAGGAGCA GTTGCGACTC
GGCCAGCAGC CCCAGGTCCA GGGCGCGCTG CCGGGGCCGA ATACGAAGAA GAACTACGAG
GACCAGCTGG ACTCCGCACG CGGTATGGTG CGCGAGGATC CCAAGCGGGT GGCCCAATTG
ATGAAGACGT GGATTGCGAG CGATGGCGCA GGGGCCTGA
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| Protein sequence | MANSMAVLSN QVRGFGRLPM ERQIGLIVAL AAAVALVSSL FMWMTRPSYT VLYPNLAEQE
SGQVAEALGR HNIPYRLDSA TGAVTVPARH LHDARLKLAT EGLPRATGFG FELLEQDQGL
GTSRLIENAR YHRAIEGELA RSIATLSSVE SARVHLALPA QSVFVRDRSK PSASVLVNLY
AGRTLDESRI AGIVHLVASS VPDLEPERVT VVDQRGRLLT QPAGDVDGVM ASTQQLDFTR
RMEESYVRRI MDILTPILGA DAVRAQVAAD LDFSRIERTT EAFDPEFSVV RSEQISEDES
RGGGMMGVPG ALTNQPPEAG VIAEEGNGAN GQAQVPGSSS RRTVRNYEVD RTVSHIREAP
GGLRRLSIAV VVDHKEERNE AGELERVPFT EQEMERITTL VREAVGFDAR RGDSINVINA
SFRPVEALEL PPEPPIWQEP WVVDLAKTIL AVIMVIVLAL TVVRPLLKGL AERGAAARRE
DQLGHLALPE GELGEEQLRL GQQPQVQGAL PGPNTKKNYE DQLDSARGMV REDPKRVAQL
MKTWIASDGA GA
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