| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1931 |
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| Symbol | |
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| ID | 7316320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2052493 |
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| End bp | 2054628 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616824 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_002513999 |
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| Protein GI | 220935100 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.161576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAG CAAGACAGGT CCTGCGGGAC ACCTTCGGCT ACCCCGATTT TCGCCCCACC
CAGGGAGAGA TCGTCGAACA CCTGGTGGCG GGCAATGAGG CCCTGGTCCT CATGCCCACC
GGCGGCGGCA AGTCGCTGTG CTACCAGATC CCCTCCCTGG TGCGGTCTGG CACCGGCATC
GTGGTCTCGC CGCTGATCGC CCTGATGCAG GACCAGGTGG ACGCACTCCG GCAGGTGGGC
GTGCGTGCCG CGTTCCTGAA CTCAAGCCTC GATGCCCGCA CCGCCCGGGA GGTGGAACAG
GCCCTGCTGG CCGGGGAGCT GGATCTCCTC TACGTGGCCC CCGAACGCCT CATGACCGAG
CGCATGATGG ACCTGCTCAC GCGCAGCCGG CTGGCCCTGT TCGCCATCGA CGAGGCCCAC
TGCGTGTCGC AATGGGGCCA CAACTTCCGC CCCGAATACC TCAAGCTCTC CGCCCTGCAC
GAGCGTTTTC CCGAGGTGCC CCGGGTGGCA CTCACCGCCA CCGCTGACGC ACCCACCCGC
AAGGAGATCG CCGAGCGCCT GGGGCTCACC GAGGCCCGGC ATTTCATCAG CGGCTTCGAC
CGGCCCAACA TCCGTTACCG GGTGACCCAG AAACACGCCG GCACCCGCAA CGAGCTGCTG
CGTTTCATCA AGGACAATCA CCCGGGCGAG GCAGGCATCG TCTACTGCCT GTCGCGCAAG
AAGGTGGACG ACACGGCCCA ATGGCTGGAG GGCAAGGGCC TCACCGCGCT GCCCTATCAC
GCCGGTCTGG CCCAGGAGGT CCGCCAGGAC CACCAGTCCC GCTTCCTGCG CGAGGAGGGG
GTGATCGTGG TCGCCACCAT CGCCTTCGGC ATGGGCATCG ACAAGCCCAA CGTGCGCTTC
GTGGCGCACC TGGACCTGCC CAAGAGCCTG GAGGCCTATT ACCAGGAGAC CGGCCGTGCC
GGCCGCGACG GCCTGCCCGC GGATGCCTGG ATGGCCTACG GCCTGCAGGA CGTGATCATG
TTGCGCCAGA TGCTGGAGGC CTCCGAGGCG GAGGAGACCC ACAAGCGCAT CGAGCGGGCG
CGCCTGGAGG CCATGCTGGG TTACTGCGAG CTGACCACCT GCCGCCGCCA GCGTCTGCTG
GAGTACTTCG GCGAGCGCCT GCCCGAGCCC TGCGGCAACT GCGACACCTG CCTGGAGCCG
CCCGAGACCT GGGATGCCAC CGTGGCAGCC CAGAAGGCGC TCTCCTGTGT GCACCGCACC
GGCCAGCGCT TCGGCGTGAA CCACGTGCTG GACGTGCTGC TGGGCAAGGA CAGCGAGCGC
ATCCGGCAAC TGGGCCACGA CAAGCTGTCC ACCTACGGCA TCGGCAAGGA ACTGGACGCC
CACCAGTGGC GCGCTGTGTT CCGCCAGCTG GTGGCCGCCG GCCTGCTCAC CGTGGACGCC
GAAGGTTTCG GCGCCCTGAA ACTCACCGAG GCCTGCCGCC CCGTGCTGCG CGGCGAACAG
GAAGTCTGGC TGCGCAAGGA TGCCCGCCCG CCCCGGGGCG GGGGTCGCAA AGAGCGGGTC
AGCAAGCGGG TCTCCACGGG CCCCGTGGAC GGACCCGGCG AGGCCCTGTT CGACGCCCTG
CGCGCCCTGC GCCGCAGTCT CGCCGATGCC CAGGACGTGC CCGCCTACGT GATCTTCAAC
GACGCCACCC TGCGCGAGAT GGTGGCGGTC CAGCCCCGCA CCCTGGACGA GCTGGCGGAG
GTCTCCGGTG TCGGCCAGCG CAAGCTTTCC CAGTACGGCG AGGATTTCCT GTCGGTGATC
CTGGAGTATG CCGGGTCCGG GGATGACAGC GGTGTCAGCG ACACGGTGCT GGAGACCCTG
TCCCTGTTCC GCCTGGGCTT CGACGCCGAG GCCATCGCCG CCCGGCGCGG GCTGACCACG
GACACCGTCT ACAACCACCT GGCCCGCTCG GTGCAGGCCG GGGAGATTCC TTTGCGCGAG
GCGGTGGGCT TGTCCGATGC CGAGCTCAAG CAGGTGGAAG AGGCCTTCGA TGCCCATTTC
GATCCGGCGG CGCCGGCGCT TCGGCCGGTG TTTGATGCGC TGGATGGGGT GTATTCGTAT
GGGGTGTTGC GGTGTGTGCA GGCGGGGAGG GGGTAG
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| Protein sequence | MDTARQVLRD TFGYPDFRPT QGEIVEHLVA GNEALVLMPT GGGKSLCYQI PSLVRSGTGI
VVSPLIALMQ DQVDALRQVG VRAAFLNSSL DARTAREVEQ ALLAGELDLL YVAPERLMTE
RMMDLLTRSR LALFAIDEAH CVSQWGHNFR PEYLKLSALH ERFPEVPRVA LTATADAPTR
KEIAERLGLT EARHFISGFD RPNIRYRVTQ KHAGTRNELL RFIKDNHPGE AGIVYCLSRK
KVDDTAQWLE GKGLTALPYH AGLAQEVRQD HQSRFLREEG VIVVATIAFG MGIDKPNVRF
VAHLDLPKSL EAYYQETGRA GRDGLPADAW MAYGLQDVIM LRQMLEASEA EETHKRIERA
RLEAMLGYCE LTTCRRQRLL EYFGERLPEP CGNCDTCLEP PETWDATVAA QKALSCVHRT
GQRFGVNHVL DVLLGKDSER IRQLGHDKLS TYGIGKELDA HQWRAVFRQL VAAGLLTVDA
EGFGALKLTE ACRPVLRGEQ EVWLRKDARP PRGGGRKERV SKRVSTGPVD GPGEALFDAL
RALRRSLADA QDVPAYVIFN DATLREMVAV QPRTLDELAE VSGVGQRKLS QYGEDFLSVI
LEYAGSGDDS GVSDTVLETL SLFRLGFDAE AIAARRGLTT DTVYNHLARS VQAGEIPLRE
AVGLSDAELK QVEEAFDAHF DPAAPALRPV FDALDGVYSY GVLRCVQAGR G
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