Gene Tgr7_1916 details

Gene Information

• Locus tag: Tgr7_1916
• ID: 7315248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 2040969
• End bp: 2042798
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643616809
• Product: pyruvate carboxylase subunit B
• Protein accession: YP_002513984
• Protein GI: 220935085
• COG category: [C] Energy production and conversion
• COG ID: [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.566124
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAGA TCATGATCAC CGATCTCACC CTGCGCGACG GCCACCAGAG CCTGATCGCC 
ACGCGCATGC GCACCGAGGA CATGCTGCCG ATATGCGAGC GCATGGACCG GATCGGCTTC 
TGGTCCATGG AGGTCTGGGG CGGCGCCACC TTCGACGCCT GCGTGCGCTT CCTCAAGGAA 
GACCCCTGGG AGCGCCTGCG CAAGCTGCGC GAGGCCCTGC CCAACACTCG CCTGCAGATG 
CTGCTGCGCG GCCAGAACCT GGTGGGCTAC CGACACTATG CCGACGACGT GGTGCGCAGC 
TTCGTGGCCC GCTCCGCCGC CAACGGCATG GACGTGTTCC GCATCTTCGA CGCCATGAAC 
GACACCCGCA ACCTGCGCGT GTCCATCGAG GCGGTGAAGC AGGAAAACAA GCACGCCCAG 
GGCACCATCA GCTATACCAC CAGCCCGGTG CACAACATCG CCCAGTTCGT GGCCATGGCC 
CGGGAGATGG TGGACATGGG CTGCGACAGC ATCGCCATCA AGGACATGGC CGGCCTGCTG 
ACCCCGTCCA CCACCGCGGA ACTGGTGAGC GAGCTGGTGG CGGCGGTCAA GGTACCCGTG 
CACCTGCACA CCCACGCCAC CTCGGGGCTC GCCGAGATGT GCCACCTCAA GGCCATCGAG 
CACGGCGTGA GCGTGATCGA CACCGCCATG TCCGCCTTCG CCGGCGGCAC CAGCCACGCG 
CCCACCGAGA GCATGGTGGC GGCCCTCAAG GGCACGGAGT ACGACACCGG CCTGGACCTG 
GAGGCCCTGC AGGAGATCGG CTTCTACTTC CACGAGGTGC GCAAGAAATA CCACCAGTAC 
GAAAGCGAGT TCACCGGCAT CGACACCCGG GTGCAGACCA CCCAGGTGCC CGGCGGCATG 
ATCTCCAACC TGGCCAACCA GTTGCGCGAA CAGGGCGCCC TGGACAAGAT GAACCTGGTG 
ATGAAGGAGA TCCCCCGGGT GCGCGAGGAC CTGGGCTACC CGCCCCTGGT CACCCCCACC 
TCCCAGATCG TCGGCACTCA GGCTGTCATG AACGTGCTCA CCGGCGAGCG CTACAAGACC 
ATCACCAACG AGGTGAAGCT CTACCTCCAG GGCCGCTACG GCCGCACCCT GGGCACGGTG 
AACAGCGTGG TACGGCAGAA GGCCATCGGC AACGCCGAGG TGATCGACTG CCGCCCTGCC 
GACCTGCTGG ACGACGAGCT TGAGAACCTG CGCGAGCAGG CCGGCGAGCT GGCCCAGAGC 
GAGGAGGACG TGCTGATCTT CGCCATGTTC CCCGAGGTGG GCCGGGAGTT CCTGCAGCAG 
CGCCGCGACG GCCACCTGGT GCCCGAACCC CTGCTGCCTG CCAACGGCGG CAAGAAGGAG 
GACCAGGCCG CGCCAGTGGA ATTCCGCGTC ACCCTGCATG GCGAGACCTA CCACATCAAG 
GTCACCGGCA CCGGCCACAA GCGCGAGGAC ATGCGCCCCT TCTACGTCAC CGTGGATGGC 
ATGCCCGAAG AGATCCAGGT GGAGACCCTG GATGAACTGC TGGTGTCCGC CGAGGGCGGC 
GACACCGCCC AGCCCCGCCC CCGCGGCAAG GGCAGCCAGC GCCCCCGGGC CACCAAGCCC 
GGCCACGTGA GCACCTCCAT GCCCGGCAGC ATCACCGACG TGCTGGTCAA GGAAGGCGAC 
ACGGTCAAGG CCGGTGACGC GGTGCTGGTG CTCGAGGCCA TGAAGATGGA GACCGAGGTA 
CAGGCCCCGG TGGACGGCAC CGTCAAGGCG GTGCACGTGG CCAAGGGCGA CAGCGTCAAC 
CCGGACGAGA CCCTGGTGGA GATCGAGTGA 

 

Protein sequence

MSKIMITDLT LRDGHQSLIA TRMRTEDMLP ICERMDRIGF WSMEVWGGAT FDACVRFLKE 
DPWERLRKLR EALPNTRLQM LLRGQNLVGY RHYADDVVRS FVARSAANGM DVFRIFDAMN 
DTRNLRVSIE AVKQENKHAQ GTISYTTSPV HNIAQFVAMA REMVDMGCDS IAIKDMAGLL 
TPSTTAELVS ELVAAVKVPV HLHTHATSGL AEMCHLKAIE HGVSVIDTAM SAFAGGTSHA 
PTESMVAALK GTEYDTGLDL EALQEIGFYF HEVRKKYHQY ESEFTGIDTR VQTTQVPGGM 
ISNLANQLRE QGALDKMNLV MKEIPRVRED LGYPPLVTPT SQIVGTQAVM NVLTGERYKT 
ITNEVKLYLQ GRYGRTLGTV NSVVRQKAIG NAEVIDCRPA DLLDDELENL REQAGELAQS 
EEDVLIFAMF PEVGREFLQQ RRDGHLVPEP LLPANGGKKE DQAAPVEFRV TLHGETYHIK 
VTGTGHKRED MRPFYVTVDG MPEEIQVETL DELLVSAEGG DTAQPRPRGK GSQRPRATKP 
GHVSTSMPGS ITDVLVKEGD TVKAGDAVLV LEAMKMETEV QAPVDGTVKA VHVAKGDSVN 
PDETLVEIE