| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1907 |
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| Symbol | |
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| ID | 7315239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2032602 |
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| End bp | 2034431 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616800 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_002513975 |
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| Protein GI | 220935076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.791613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC AGTACGAGGC CGCACCCTTC GATCCCGCCA GCTTCCTGCG CACCCTGACC
CATCGTCCGG GGGTGTACCG GATGCTGGGC GGGGCGGGGG AGGTGCTCTA CGTGGGCAAG
GCCAAGGACC TGAAGAAACG GGTCGCCAGC TATTTCCGCA GCAACGTGAG CAGCGCGCGG
ATCCGCTCCA TGGTGAGCCA GATCCACAAC ATCGAGGTCA CCGTCACCCG CACCGAGGCC
GAGGCCCTGC TGCTGGAGAG CAACCTCATC AAGGAGCACC GGCCCCGCTA CAACGTGCTG
CTGCGGGACG ACAAGAGTTA CCCCTACATC CTGGTCACCG ACCACGCCTT CCCGCGCCTG
ACCTTCCACC GGGGCGCGCG CAAGCCCGGC GGCCGCTACT TCGGCCCCTA TCCCTCGGCG
GGGGCGGTGC GCGAGACCCT GAACCTGCTG CAGAAGCTGT TCCTGGTGCG CCAGTGCGAG
GACAGCTTCT TCCAGAACCG CTCCCGGCCC TGCCTGCAGT ACCAGATCCG GCGCTGCACC
GCGCCCTGCG TAGGGCTCGT CAACGAGGCC ACCTACCGGC AGGACGTGGA ACACGCGGTG
CAGTTCCTGG AGGGCAAGAG CGAGGCGGTG ATCCGCGACC TGGTGGTGCG CATGGAGCAG
GCCTCCGAGC GACTCGCCTT CGAGGAGGCG GCCCGTTACC GGGACCAGAT CACCCGGCTG
CGACAGATCT CCGAGCAGCA GTACATCAGC GGCGCGGGTG GCGACGTGGA CATCATCGCC
TGTCACCAGG CCTCCGGTCA GGCCTGCGTG CAGGTGTTCT TCGTGCGCGG CGGACACCAC
CTGGGCAACA AGGCCCTGTT CCCCAGCGTG CCCGAGGACA CCAGTGCCGA GGAACTGATC
AGCGCCTTCC TGGCCCAGTA TTACCTGAGC CGCGAGGTGC CCGCGGAGAT CATCCTGAGC
CATGTCCCGG AGGACGCGGA GGTGCTCACG GAGGTGCTCG GTGAGCGCCG GGGCAGGGCG
GTGAGCCTGA GCTGGAACGT GCGCGGCGAG CGGGCCCGCT GGCTGGAGAT GGCCGAGCGC
AACGCGGAAC TGGCCCTGCG CACCCGGCTC GCCAGCCGCG CCGGCATGCG CGAGCGCCTG
GAGGCCCTGG CCGAGGCCCT GGACCTGGAC GAGTTGCCTT CGCGGATGGA GTGTTTCGAC
ATCAGCCATA CCCAGGGAGA GCTCACCGTG GCCTCCTGCG TGGTGTTCGA TGCCGAGGGG
CCGGTGAAGT CCGACTACCG GCGCTTCAAC ATCGAGGGCA TCACCCCTGG GGATGACTAC
GCCGCCATGC GCCAGGCCCT GCAGCGGCGC TACACGCGCC TCAAGGAGGG CGAGGGGCGT
CTGCCGGACG TGCTGTTCAT CGACGGCGGC AAGGGCCAGG TGCGCCAGGC CCTGGAGGTG
CTGGAGGAAC TGCAGGTCCA GGGGGTGAGC GTGGTGGGCG TGGCGAAGGG GGCGGACCGC
AAGCCGGGGC TCGAGACCCT CGTGTTGAGC GACTCCGAGC GCCCGACTAT ACTGCCGCCG
GGCTCCAGTG CCCTGCATCT CATCCAACAG ATCCGCGACG AGGCGCACCG ATTCGCCATC
ACTGGCCACC GCCAGCGACG TGCCAAGGCG CGCACCGCTT CTCCCCTGGA GCAGATCCCC
GGCATGGGCC CGAAGCGTCG CCAGCAGTTA CTCAAGCATT TCGGCGGGCT GCGCGGCGTG
AGCCGGGCCG GCGTGGCCGA GCTGTCCAAG GTCCCGGGCA TCAGCCGGAA GCTGGCACAG
CAGATCTACG ACAGCTTTCA TGAAGGCTGA
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| Protein sequence | MSEQYEAAPF DPASFLRTLT HRPGVYRMLG GAGEVLYVGK AKDLKKRVAS YFRSNVSSAR
IRSMVSQIHN IEVTVTRTEA EALLLESNLI KEHRPRYNVL LRDDKSYPYI LVTDHAFPRL
TFHRGARKPG GRYFGPYPSA GAVRETLNLL QKLFLVRQCE DSFFQNRSRP CLQYQIRRCT
APCVGLVNEA TYRQDVEHAV QFLEGKSEAV IRDLVVRMEQ ASERLAFEEA ARYRDQITRL
RQISEQQYIS GAGGDVDIIA CHQASGQACV QVFFVRGGHH LGNKALFPSV PEDTSAEELI
SAFLAQYYLS REVPAEIILS HVPEDAEVLT EVLGERRGRA VSLSWNVRGE RARWLEMAER
NAELALRTRL ASRAGMRERL EALAEALDLD ELPSRMECFD ISHTQGELTV ASCVVFDAEG
PVKSDYRRFN IEGITPGDDY AAMRQALQRR YTRLKEGEGR LPDVLFIDGG KGQVRQALEV
LEELQVQGVS VVGVAKGADR KPGLETLVLS DSERPTILPP GSSALHLIQQ IRDEAHRFAI
TGHRQRRAKA RTASPLEQIP GMGPKRRQQL LKHFGGLRGV SRAGVAELSK VPGISRKLAQ
QIYDSFHEG
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