Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1907 |
Symbol | |
ID | 7315239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2032602 |
End bp | 2034431 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643616800 |
Product | excinuclease ABC subunit C |
Protein accession | YP_002513975 |
Protein GI | 220935076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.791613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC AGTACGAGGC CGCACCCTTC GATCCCGCCA GCTTCCTGCG CACCCTGACC CATCGTCCGG GGGTGTACCG GATGCTGGGC GGGGCGGGGG AGGTGCTCTA CGTGGGCAAG GCCAAGGACC TGAAGAAACG GGTCGCCAGC TATTTCCGCA GCAACGTGAG CAGCGCGCGG ATCCGCTCCA TGGTGAGCCA GATCCACAAC ATCGAGGTCA CCGTCACCCG CACCGAGGCC GAGGCCCTGC TGCTGGAGAG CAACCTCATC AAGGAGCACC GGCCCCGCTA CAACGTGCTG CTGCGGGACG ACAAGAGTTA CCCCTACATC CTGGTCACCG ACCACGCCTT CCCGCGCCTG ACCTTCCACC GGGGCGCGCG CAAGCCCGGC GGCCGCTACT TCGGCCCCTA TCCCTCGGCG GGGGCGGTGC GCGAGACCCT GAACCTGCTG CAGAAGCTGT TCCTGGTGCG CCAGTGCGAG GACAGCTTCT TCCAGAACCG CTCCCGGCCC TGCCTGCAGT ACCAGATCCG GCGCTGCACC GCGCCCTGCG TAGGGCTCGT CAACGAGGCC ACCTACCGGC AGGACGTGGA ACACGCGGTG CAGTTCCTGG AGGGCAAGAG CGAGGCGGTG ATCCGCGACC TGGTGGTGCG CATGGAGCAG GCCTCCGAGC GACTCGCCTT CGAGGAGGCG GCCCGTTACC GGGACCAGAT CACCCGGCTG CGACAGATCT CCGAGCAGCA GTACATCAGC GGCGCGGGTG GCGACGTGGA CATCATCGCC TGTCACCAGG CCTCCGGTCA GGCCTGCGTG CAGGTGTTCT TCGTGCGCGG CGGACACCAC CTGGGCAACA AGGCCCTGTT CCCCAGCGTG CCCGAGGACA CCAGTGCCGA GGAACTGATC AGCGCCTTCC TGGCCCAGTA TTACCTGAGC CGCGAGGTGC CCGCGGAGAT CATCCTGAGC CATGTCCCGG AGGACGCGGA GGTGCTCACG GAGGTGCTCG GTGAGCGCCG GGGCAGGGCG GTGAGCCTGA GCTGGAACGT GCGCGGCGAG CGGGCCCGCT GGCTGGAGAT GGCCGAGCGC AACGCGGAAC TGGCCCTGCG CACCCGGCTC GCCAGCCGCG CCGGCATGCG CGAGCGCCTG GAGGCCCTGG CCGAGGCCCT GGACCTGGAC GAGTTGCCTT CGCGGATGGA GTGTTTCGAC ATCAGCCATA CCCAGGGAGA GCTCACCGTG GCCTCCTGCG TGGTGTTCGA TGCCGAGGGG CCGGTGAAGT CCGACTACCG GCGCTTCAAC ATCGAGGGCA TCACCCCTGG GGATGACTAC GCCGCCATGC GCCAGGCCCT GCAGCGGCGC TACACGCGCC TCAAGGAGGG CGAGGGGCGT CTGCCGGACG TGCTGTTCAT CGACGGCGGC AAGGGCCAGG TGCGCCAGGC CCTGGAGGTG CTGGAGGAAC TGCAGGTCCA GGGGGTGAGC GTGGTGGGCG TGGCGAAGGG GGCGGACCGC AAGCCGGGGC TCGAGACCCT CGTGTTGAGC GACTCCGAGC GCCCGACTAT ACTGCCGCCG GGCTCCAGTG CCCTGCATCT CATCCAACAG ATCCGCGACG AGGCGCACCG ATTCGCCATC ACTGGCCACC GCCAGCGACG TGCCAAGGCG CGCACCGCTT CTCCCCTGGA GCAGATCCCC GGCATGGGCC CGAAGCGTCG CCAGCAGTTA CTCAAGCATT TCGGCGGGCT GCGCGGCGTG AGCCGGGCCG GCGTGGCCGA GCTGTCCAAG GTCCCGGGCA TCAGCCGGAA GCTGGCACAG CAGATCTACG ACAGCTTTCA TGAAGGCTGA
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Protein sequence | MSEQYEAAPF DPASFLRTLT HRPGVYRMLG GAGEVLYVGK AKDLKKRVAS YFRSNVSSAR IRSMVSQIHN IEVTVTRTEA EALLLESNLI KEHRPRYNVL LRDDKSYPYI LVTDHAFPRL TFHRGARKPG GRYFGPYPSA GAVRETLNLL QKLFLVRQCE DSFFQNRSRP CLQYQIRRCT APCVGLVNEA TYRQDVEHAV QFLEGKSEAV IRDLVVRMEQ ASERLAFEEA ARYRDQITRL RQISEQQYIS GAGGDVDIIA CHQASGQACV QVFFVRGGHH LGNKALFPSV PEDTSAEELI SAFLAQYYLS REVPAEIILS HVPEDAEVLT EVLGERRGRA VSLSWNVRGE RARWLEMAER NAELALRTRL ASRAGMRERL EALAEALDLD ELPSRMECFD ISHTQGELTV ASCVVFDAEG PVKSDYRRFN IEGITPGDDY AAMRQALQRR YTRLKEGEGR LPDVLFIDGG KGQVRQALEV LEELQVQGVS VVGVAKGADR KPGLETLVLS DSERPTILPP GSSALHLIQQ IRDEAHRFAI TGHRQRRAKA RTASPLEQIP GMGPKRRQQL LKHFGGLRGV SRAGVAELSK VPGISRKLAQ QIYDSFHEG
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