| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1893 |
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| Symbol | |
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| ID | 7315223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2018806 |
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| End bp | 2020818 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643616784 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002513961 |
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| Protein GI | 220935062 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGA CAAACGTGCT GTTCGGTCAG ATCGCCGTGG TGTTCGGCAT CGTGATCGCC
GGCGTGTGGG GCGCCACACA GTGGACAGCA GCAGCCCTTG GTTATCAAGT ACGCCTTGGC
TCGCCCTGGT TCGATATTCT TGGCACGCCG ATCTATTACC CGTGGAAGCT GTTTGAGTGG
TGGTTCTCTT ACGGCGCCTA TACCCCGGAA ATCTTCGACA CGGGCGGTGC CATCGCCGGC
AGCAGTGGCA TGGTCGCAGT GACCGTCGCC ATTGCTATGT CGGTCTGGCG CTCGCGGCAG
GCACGCCTTG TCACGACCTA CGGATCGGCC CGCTGGGCAA ACGCGCAGGA CATTCGCAAG
GCGGGTCTCA CGCAGCCGGC GGGCGTGTTC CTCGGCCAGC ACGACCGCCA GTACCTGCGC
CATGAAGGGC CAGAGCATGT CCTGACGTTC GCACCCACGC GCAGCGGCAA GGGCGTCGGC
CTCGTGGTGC CGACGCTGCT TTCCTGGCCC GCGTCCGCCG TCATCCACGA CATCAAGGGC
GAGAACTGGC AGATCACCGC AGGCTGGCGC TCGCGTTTCT CGCACTGCCT GCTGTTCAAC
CCCACGGATG CGAAGTCGGC GGCCTACAAC CCGCTGCTGG AGGTACGGCG CGGCGCGCAT
GAAGTGCGCG ACGTGCAGAA CATCGCGGAC ATCCTGGTCG ATCCCGAAGG CGCGCTGGAG
AAACGCAACC ATTGGGAAAA AACTTCGCAC GCGCTGCTGG TCGGCGCCAT CTTGCACGTC
CTTTACGCCG GGCAGGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTCTC CGACCCGGCC
AGCCCATTCG AGCTGACCTT GCACCGGATG ATGACCACGC CGCACCTCGT GAACGAGGAA
GGTGGTGGCC CGCATCCCGT TGTGGCGTCC GCTGCGCGCG AAGTGCTCAA CAAGTCGGAC
AACGAGCGTT CTGGCGTGTT GAGCACCGCC ATGTCGTTCC TCGGCCTTTA TCGCGATCCC
ACTGTGGCCG AAGTCACCTC GCGCTGCGAC TGGCGCATTG CCGACCTGAT CGCCGCCGAG
CATCCGGTAT CGCTGTACCT GGTGGTGCCG CCTTCGGACA TTAGCCGCAC GAAGCCGCTG
ATCCGCCTGA TCCTCAACCA GATCGGACGG CGGCTCACCG AATCGCTGGA CGGCTCCGAC
GGCATCAAGC GCCGCCACAA GCTGCTGCTG ATGCTCGATG AGTTTCCGGC ACTCGGGCGC
TTGGATTTTT TCGAGACCGC GTTGGCCTTC ATGGCGGGCT ACGGCATCCG CAGCTTCCTC
ATCGCGCAGT CGCTCAACCA GATCGACAAA GCCTACGGCC AAAACCATTC GATTCTGGAC
AACTGCCATG TGCGTGTGAC GTTCGCCACC AACGATGAAC GCACCGCCAA GCGCATTTCC
GAGACGTTGG GCACCGCGAC CGAGTTGCGC GCACAGCGCA ACTACGCGGG CCACCGGCTC
GCGCCGTGGC TGGGCCACCT CATGGTGTCG CGCCAGGAGA CGGCCCGCCC GCTGCTGACG
CCCGGCGAAG TCATGCAGCT TCCGCCCGAC GAGGCCGTGG TGATGGTCTC CAGCGTGGCG
CCGATCCGGG CAAAGAAGCT GCGCTACTAC GCGGACGCCA ATTTCAAGCG GCGCGTGCTG
TCGCCGCCCG TGTTGGCGGA CAGCCAATAC GCCGACGCGC CGCCGCTGCG CCCCGACGAC
TGGAGCGGGC TGGCAATCCC ACCAACGCCC ACCGCACCGG CCACGGCACC CGCCGATGGC
CTCGGTTCCG CCGACGACGG CGGCCCGCGC CGTCAGCCCG AGCTTTCCGA AGTCGTCGCC
TACGACCCCG AGTTGGCCGC GCCCGCAGCT GACCTCGGGC TGCTCGATGA CGACGACGAC
CTGCCGCTTC CCCTTCCTCG CCAGCTCGAT CCGGCCATGC AGCGCGCGGC CCGGCTGGCA
TCGCTGAACC CCAACGACGG AATCGAGCTA TGA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWGATQWTA AALGYQVRLG SPWFDILGTP IYYPWKLFEW
WFSYGAYTPE IFDTGGAIAG SSGMVAVTVA IAMSVWRSRQ ARLVTTYGSA RWANAQDIRK
AGLTQPAGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
KRNHWEKTSH ALLVGAILHV LYAGQDKTLR GVANFLSDPA SPFELTLHRM MTTPHLVNEE
GGGPHPVVAS AAREVLNKSD NERSGVLSTA MSFLGLYRDP TVAEVTSRCD WRIADLIAAE
HPVSLYLVVP PSDISRTKPL IRLILNQIGR RLTESLDGSD GIKRRHKLLL MLDEFPALGR
LDFFETALAF MAGYGIRSFL IAQSLNQIDK AYGQNHSILD NCHVRVTFAT NDERTAKRIS
ETLGTATELR AQRNYAGHRL APWLGHLMVS RQETARPLLT PGEVMQLPPD EAVVMVSSVA
PIRAKKLRYY ADANFKRRVL SPPVLADSQY ADAPPLRPDD WSGLAIPPTP TAPATAPADG
LGSADDGGPR RQPELSEVVA YDPELAAPAA DLGLLDDDDD LPLPLPRQLD PAMQRAARLA
SLNPNDGIEL
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