| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1885 |
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| Symbol | |
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| ID | 7315215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 2008373 |
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| End bp | 2011114 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643616776 |
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| Product | sensor protein KdpD |
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| Protein accession | YP_002513953 |
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| Protein GI | 220935054 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.899073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACCG AACATACGGG ACAAGCCGAC GCCTTGCTGG GGGAAATCAA GCGCCAGACC
GCAGGACGTC TGACGGTGTT CCTGGGCGCC GCCCCCGGTG TCGGCAAGAC CTACGCGATG
CTGGCGCGCG CGCGCGAACT CCACCGCCAA GGGGTGGATG TCGTCATTGG CATCGTCGAG
ACACATGGCC GCAGCGAGAC CCAGACCATG GTCGAGGGTC TGCCGCTGTT GCCTCGCAAG
AAGGTCGAAT ACCAGGGACG GCAACTGGAG GAGATGGACC TGGATGGTTT GCTGGGGCGC
AAGCCGGCCA TCGCCCTGGT CGACGAGCTG GCCCATCGCA ACGCTCCCGG AAGCCGTCAT
GAGCGGCGCT GGCAGGATGT GGAGGAATTG CTCAACGCTG GTATCGACGT TTACACCACG
GTCAATATCC AGCATCTGGA AAGTCTGAAC GACGTGGTGC ACCAGATCAC TGGTATCCGG
GTGAGCGAGA CTGTTCCCGA CGCCGTTTTC GAGCGCCTGC GTGACATCCG CCTGGTGGAT
TTGCCTGCGC GAGAACTGAT CGAACGCCTG AACGATGGCA AGGTGTATTT GCCCGAGCAG
GCCGCCCAGG CGCTGCAGGC GTTCTTCTCG CCGTCGAATC TCACCGCTCT GCGCGAGCTG
GCGATGCAAA CCGTGGCCGA TCACGTCGAT GCCGACTTGC GCGAGACGCG CGCGGCGCGC
GGCCTGGAAG GCATTTCCAT CCAGCGCCAT GTGCTGATCG CCATTGACGG CCGGGGGCAG
TCGGAATACC TCGTAAGAGC GGGGGCTCGA ATCGCCGAGC GCCGGGGCGC TCCTTGGTCG
GTGGTCACGG TGGAGACCGG GCGCTCGGCC GATGCCGCCT TGCACACTGA CGACCTTTAC
CGGACGGCCC CCACGCGCAA CATGGTTGCG CGTGCGGAGC AGCAGCGCTT GATCGAGATC
GACAAGGCAT TCGCGCTGGC GCGCAATCTG GGTGGCGAGA CGGAAGTGCT GCACAACACC
GACGTCACCC AGGCACTGCT CGACGCCGCC GAGGCGCGCG GCGCACGATC CATCGTGATC
GGCCGCACGC GCGAGCGCCC CATCGTCCGC ATCTTCAATC GCACGCTGAC GCAGCAACTG
TTGCAGCGCG GCGCACGATA CGAGCTGACG ATCGTCAGCA CGCCGCAGGC CCGGCAGCGG
GCGATGGAAT TGCAGGGTCT TGCCAGCGGT CGCCTCACGG GACGGGAGGT CGTGCTGATC
CTGCTGGCCA GCGTCGGCGC CGTCGGCGCG GCGGCCTTGG CCGAGCGCAC GCTGGGCTTG
CAGGATCTGT CCCTGATCTT TCTCGTGGCG GTCATGCTCG TCGCCTCACG AACCCGCATG
CTCTCGGCCG TCATTACCGC CGGGCTGTGT TTCGTGGCAT ACAACTTCTT CTTCATCGAA
CCGCGCTACA CCTTCCTTAT CAGTGCTCAC CGTGGTGTGG CCACTGTGTT GCTGTTCTTG
GCGGCGGCTC TGATTGCCGG ACGACTAGCT TCACAACTGC GCATGCAAGT CGTGGCGTTG
CGAGCGGCGA ACACACACGC GACGGCCATG CAGAACCTGG GACGCCATCT TGCCAAGGCA
GCCGATCTCG GGCAGGTCAT CGCATCAGGC TCATCGGTTC TGCAATCGAC CCTGCACGCC
GAGGCATGGA TACGCATCAA TGGCGAGGCC GGTCCTACCA CTGCCGCGAA TCATCTGACC
GAGAAGGATC TGATGGCGGC CGACTGGACG CAGCAGCACG GGCAGGCGAG CGGGCACTAC
ACGGACACCC TGACCCATTC GTCTTGGTTG TTTCTGCCGG TGCACTCGGA CAAGAATACG
CTCGGCGTGG CCGGCTTGAG GTTCCCGTCG GGCATGGGGC GTCTTTCGTT CGAGCAGCGC
CGCCTGGCGG AAAGCATGGT GGAGGACATC GGCCAGGCCG CCCAGCGCAC GCGGCTGGTG
TCGGAACTGG AGGAAGCGCG CGTCACCGGA GAAACGGAGC GCCTGCGGTC CGCGCTGCTG
TCGTCGGTGT CGCACGACCT GCGTTCGCCC CTGTCGTCGA TGATCGGAGC AGCGGACAGC
TTGGCTCGCT ACGCCAAGGA TATGGGGCCG GAGGATCAGA AAAGCCTGCT GGAGACCATC
CATGTGGAAG GCGAGCGCCT GGATCGGTAC ATCCAGAACC TGCTCGACAT GACCCGGCTC
GGGCAGCAGG GACTGACGCT GACACGCGAC TGGATCGGCA TCGACGAGTT GGTGGGTTCA
GCGTCCAGGC GTTTGCAACG GTACGAGCCC GATGTACGCA TCGAACACGA TATTCCCCCC
GACCTGCCTC CGATCCATGT CCACCCCGCG CTCATCGAGC AGGCTCTGTT TAATGTGATG
GAGAACGCGG CGAAGTTCTC CCCTCCGGGT GTGCCCATCC GGGTGCAGAT TCGACGGACC
GAGGACGATC AATTACGAAT CGACATTTCG GACCGTGGGC CAGGCATTCC AGAAGACGAA
CGACGCCGCA TCTTCGATAT GTTCTACAGC GTGGAGCGTG GCGACCGGGG CAAGCAGGGA
ACCGGCCTGG GACTGACGAT CGTCCAAGGT ATCGTGGGTG CCCATATGGG CAGTGTCCAA
GCGCTGCCGG GACCAGAAGG CAAGGGAACT ACCATCCGTT TGACCTTGCC TTGGGGCGGG
TACGCCAATC AGGAGGCGAA AGAACATGAT GGGACGTCCT AG
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| Protein sequence | MGTEHTGQAD ALLGEIKRQT AGRLTVFLGA APGVGKTYAM LARARELHRQ GVDVVIGIVE
THGRSETQTM VEGLPLLPRK KVEYQGRQLE EMDLDGLLGR KPAIALVDEL AHRNAPGSRH
ERRWQDVEEL LNAGIDVYTT VNIQHLESLN DVVHQITGIR VSETVPDAVF ERLRDIRLVD
LPARELIERL NDGKVYLPEQ AAQALQAFFS PSNLTALREL AMQTVADHVD ADLRETRAAR
GLEGISIQRH VLIAIDGRGQ SEYLVRAGAR IAERRGAPWS VVTVETGRSA DAALHTDDLY
RTAPTRNMVA RAEQQRLIEI DKAFALARNL GGETEVLHNT DVTQALLDAA EARGARSIVI
GRTRERPIVR IFNRTLTQQL LQRGARYELT IVSTPQARQR AMELQGLASG RLTGREVVLI
LLASVGAVGA AALAERTLGL QDLSLIFLVA VMLVASRTRM LSAVITAGLC FVAYNFFFIE
PRYTFLISAH RGVATVLLFL AAALIAGRLA SQLRMQVVAL RAANTHATAM QNLGRHLAKA
ADLGQVIASG SSVLQSTLHA EAWIRINGEA GPTTAANHLT EKDLMAADWT QQHGQASGHY
TDTLTHSSWL FLPVHSDKNT LGVAGLRFPS GMGRLSFEQR RLAESMVEDI GQAAQRTRLV
SELEEARVTG ETERLRSALL SSVSHDLRSP LSSMIGAADS LARYAKDMGP EDQKSLLETI
HVEGERLDRY IQNLLDMTRL GQQGLTLTRD WIGIDELVGS ASRRLQRYEP DVRIEHDIPP
DLPPIHVHPA LIEQALFNVM ENAAKFSPPG VPIRVQIRRT EDDQLRIDIS DRGPGIPEDE
RRRIFDMFYS VERGDRGKQG TGLGLTIVQG IVGAHMGSVQ ALPGPEGKGT TIRLTLPWGG
YANQEAKEHD GTS
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