| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1860 |
|---|
| Symbol | |
|---|
| ID | 7315190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1981899 |
|---|
| End bp | 1982672 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643616751 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002513928 |
|---|
| Protein GI | 220935029 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC GCCGCAACTG GATCGCCTTC CAGACCATCG TCATCAAGGA AGTTCTGCGC
TTCATGCGCA TCTGGGTGCA GACCGTGCTG CCGCCGGCCA TCACCACGGC GCTCTATTTC
ATCATCTTCG GCGGCCTGAT CGGTTCGCGC ATCGGCGAGA TGGACGGCCT GCGCTACATG
GACTTCATCG TCCCCGGCCT GATCATGATG ACCATCATCA CCAACTCCTA CGCCAACGTG
GTGTCGTCCT TCTACGGCTC CAAGTTCCAG CATCACATCG AGGAGATGCT GGTGGCCCCT
ATCCCCAACG CGCTCATCAT CCTGGGCTTC GTGGCCGGCG GCGTGTGCCG GGGGCTCACT
GTGGGCGTGG CGGTCACCCT GGTGTCGCTG CTGTTCAGTC CCTTCAGCAT GCACAGCCTC
GGCGTGACGC TCTCGGTGGT GCTGCTCACC TCCGTGCTGT TCTCCCTGGC AGGCCTGATC
AACGGCATCT ACGCCAAGAG CTTCGACGAC ATCTCCATCA TCCCCACCTT CGTGCTCACC
CCGCTCACCT ACCTGGGTGG CGTGTTCTAT TCCATCACCA TGCTGCCGGA GTTCTGGCAG
GGGGTCTCAC ACCTCAATCC CATCCTGTAC ATGGTCAACG CCTTCCGCTA CGGGCTGCTC
GGGGTGAGCG ACATCAACCT GTGGCTCTCC TACGCCATCA TCCTGGGCTT CATCGCCGCG
CTGTTTTCCT TCAGCCTGTA CCTGCTCAAC AAGGGGCATG GCATCCGCAA CTGA
|
|---|
| Protein sequence | MSLRRNWIAF QTIVIKEVLR FMRIWVQTVL PPAITTALYF IIFGGLIGSR IGEMDGLRYM
DFIVPGLIMM TIITNSYANV VSSFYGSKFQ HHIEEMLVAP IPNALIILGF VAGGVCRGLT
VGVAVTLVSL LFSPFSMHSL GVTLSVVLLT SVLFSLAGLI NGIYAKSFDD ISIIPTFVLT
PLTYLGGVFY SITMLPEFWQ GVSHLNPILY MVNAFRYGLL GVSDINLWLS YAIILGFIAA
LFSFSLYLLN KGHGIRN
|
|---|
| |