Gene Tgr7_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1833 
Symbol 
ID7317643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1945751 
End bp1946989 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content66% 
IMG OID643616724 
Productbeta-ketoacyl synthase 
Protein accessionYP_002513901 
Protein GI220935002 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0449277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAAAC GGCGCGTCGT CATCACTGGA CTGGGGATCG TCTCCCCGGT CGGATCCACC 
ATCCAGTCCG CCTGGGACAA CATCACCGCA GGCCGCAGCG GGATTACACC CATTGACGTC
TTTGACGCCT CCGAGATGCC GGTGCGCATC TCCGGCGCGG TGCGGGACTT CAATGCCGAC
GATTACATCA CCCCCAAGGA CCAGCGCAAG ATGGACACCT TCGTCCATTA CGGCATCGCC
GCTGGCCTGC AGGCCATCAA GGATTCCGGC CTCGAGGTGA CCGAGCAGAA CGCAGAGCGC
ATCGGCGTGG CCATCGGCTC CGGCATCGGC GGTCTGCCCT ACATCGAGAA GAGCCACACG
GCCTATCTCA ACGGTGGTGC CCGCAAGATC TCGCCCTTCT TCGTGCCCAG CGCGATCATC
AACATGGTGG CCGGCAACCT GTCCATCATG TGTGGCCTGA AGGGTCCGAA CATCTCCATC
GTCTCCGCCT GCGCCACCGG TACCCACAAC ATCGGTGATG CCGCGCGCAT GATCATGTAC
GGCGACGTGG ACGTGATGGT CGCCGGTGGT GCCGAGATGG CCACCACGCC GCTGGGCATC
GGCGGCTTCG CTGCCGCCCG CGCCCTGTCC ACGCGCAACG ACGATCCCGC CCGCGCCAGC
CGTCCCTGGG ACAAGGACCG GGACGGCTTC GTGCTGGGCG ATGGCGCCGG CGCGCTGGTG
CTGGAGGAGT ACGAGCACGC CAAGGCCCGT GGTGCGCAGA TCTACTGCGA GCTGGCCGGT
TTCGGCTGGA ACAGCGACGC CTACCACATG ACCCAGCCGT CCGCGGGCGG CGAGGGTGCG
GCCAACTGCA TGCTCATGGC CCTCAGGGAC GCAGGTCTCA ATCCCACGGA CGTGGACTAC
ATCAACGCCC ACGGCACCTC CACCCCGGCC GGCGACGTGG CCGAGACCAT GGCCGCCAAG
CGCGCCCTGG GCGATCACGC CTACAAGGTG GCCATCAGCT CCACCAAGTC CATGACCGGC
CACCTGCTGG GTGCCGCCGG CGGCGTGGAG GCGGTGTTCC TGGCCCTGGC CATGAAGCAC
GGCGTGATCC CCCCCACCAT CAACCTGGAC AACCCGGACC CCGAGTGCGA TCTGGACTAC
GTGCCCAATA CCGCCCGTGA GATGAAGATC AACGTGGGCC TGTCCAATTC CTTCGGATTT
GGTGGCACCA ACGGCACCCT CGTCTTCCGG ATGCTCTGA
 
Protein sequence
MSKRRVVITG LGIVSPVGST IQSAWDNITA GRSGITPIDV FDASEMPVRI SGAVRDFNAD 
DYITPKDQRK MDTFVHYGIA AGLQAIKDSG LEVTEQNAER IGVAIGSGIG GLPYIEKSHT
AYLNGGARKI SPFFVPSAII NMVAGNLSIM CGLKGPNISI VSACATGTHN IGDAARMIMY
GDVDVMVAGG AEMATTPLGI GGFAAARALS TRNDDPARAS RPWDKDRDGF VLGDGAGALV
LEEYEHAKAR GAQIYCELAG FGWNSDAYHM TQPSAGGEGA ANCMLMALRD AGLNPTDVDY
INAHGTSTPA GDVAETMAAK RALGDHAYKV AISSTKSMTG HLLGAAGGVE AVFLALAMKH
GVIPPTINLD NPDPECDLDY VPNTAREMKI NVGLSNSFGF GGTNGTLVFR ML