| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1800 |
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| Symbol | |
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| ID | 7317610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1917250 |
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| End bp | 1919325 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616692 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002513869 |
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| Protein GI | 220934970 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACG ACGCCGACCA CTGGATCGCC CCCCTGTTGC CCCTGCGCGC ACTGGGCTTC
ACCCTCGCCT TCACCGAGGA CACGCCGGCG AGGTCCTGGC TGGAGCCCGC CCTCACTGCC
TTCCTGCGCA GCCTGCTGGG CAGCCCCGCC GATTTCGACC GGCTCATGAG CCTGCGCGTC
GATCAGGTCC CCGAGGGAGA AACCTGGGTC GAGGGTGCCA CCCTGACTGC CACGCTCATC
GCCCTGCCCG GCGGCGAGGC GCTGCTTGCC TGCGCCGTGG ATCGCCTGCG CGCCCTGCCC
GGCAGCGCGC CGCGTCTTGA CCAGCCCCTT CCGGTGCGCG ACAACCTGCG CTGCCTGGAA
CTGTTCGACG GCTTCACCCG TGCGTTCGTG GAGCATGCCA CCGACCTTCA GCCCTGGGAC
GATGCAGCCT TGCAGCACGA AGTGCGGATC CTCGCCCGCC AGACCTCCCT GCAGCTGTGC
TTCACCTCCC CGGTGCGTCT TCTCAAGGCC AAGGCACTGC GCGGCGATGC GAAAGGCGAG
GCCCGCTACT GCAGCGAGGC GGCACACCTG ACCCCGGCAC TGTTGTTCGC CCGGCTCCAC
GACACCGTGG CCGACATCCT GCGCCGCCAC GGGCATGCGC CACCGCCGCG CCTGGACCTC
GGTCCTGTGC CGGGACAGGT CCTCGAGGCG CGCTGGATCG ACCATGGTTA CCGTGATGGT
GCTGGCCGCG ACCAGCCCAT GGGCGGCCTG CTGGCCAGCC TGGAACTGCA ACCGGATCGG
CTGGCGCCTG AACTGCTCAC GCTGCTGGCA CTTGGCCGCC ACCTGGGACT GGGCCAGCGG
CGCAGCTTCG GCTGGGGACG CTACCGGCTG GAAGACGAAT GGGGCATCGA GCAGCCCGTA
GGCAGTGATC GACCGGTAGG GCCCGCTGAA CCCGTCGCGC CAGCCGACCC CGTTGGCGCG
CAAACCGGCG ATGACATCGA CTGGTTCGGA CTGGACGAAA CCCCAGGCAG CGCCGAGGAG
ATCGACTGGT TCGGCGACAT GGAGGCCGAG AACCTGCCCG TGGCCCTGGG CCAGGCGGCC
GCCGAAGGCA CCCAGCTGCT GCTGGCCGGG GAACCGGCCC GGGTCGGCCT CGATGGCGGA
CGCCTGCGGG TGCAGCGGGG TGAAGCCGAA CTCCTCTCCG CGCCCCTGGA AACCCTCGCC
GGCGTCACCC TCCTCGGCCC GCACCAGGTC AGCACCCAGT TGCTGGGCGC CCTGCTGGAC
CGGGGCATCC CCCTGGCCCT GGCCACGGGC CAGGGTCGCC TGCGCGGCGT GCTCTGGAAC
GGCGTCCCGG GCGATGCCGG TCCCGGGCTA TGGATGCGCC AGGCGGCCTG TTTCGAGGAT
GACGCCCGGG CCCTCGAGGC CGCCCGCGCC GTGGTGGATG CGCGCCTGCG CCAGCAGCGT
GAAGTACTGC GCAACCGCAT GTCACCGGAA CGCTGCGACG ACCTGTTGCC GCGCCTCGAC
CGGCTCATCG CCAAGACCGC CGCGGCCTCC GACCGGGCCA GTCTCAACGG ACTGGAAGGC
CAGGCCGCCC GACTCTACTT CGGTGCCCTC GCTGAACTGC TGCCCCCCGA ACTGGGCTTT
ACCGGACGCA ACCGCCGCCC GCCCCGGGAC CCTTTCAATG TCCTGCTCTC CCTGGGCTAC
ACCGTACTCC ACGCCCACGT GGACACGGTG GTGCGGCTCA ACGGTCTCTA CCCCTGGCGC
GGCTTCTACC ACCAGCCCCA TGGCCTGCAC CCGGCGCTCG CCTCGGACCT CATGGAACCC
TTCCGCCACC TGGTGGAGCG GGTTGCGCTC AATGTCGTCG CCCGGGGACG CATCCGTGTC
AGCGACTTCG CGCAGCAGGG TGATGCCTGC CGCATCGAAG CCGGGGCCCG CCGTCGTTAC
CTGGCCGATC TCAGCGAGCG CCTGCTCACC CCCGTGCGCG CCCGGGGTGA CAGCGAGGCC
CGCAGCCTGC ATGATCACCT GCATCGCCAG GCCCGCAGCC TGATCGCCTG GATTCGCGAG
GAGGCCCCGG CCTTCGAACC CTTCCGGACC CGTTGA
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| Protein sequence | MNHDADHWIA PLLPLRALGF TLAFTEDTPA RSWLEPALTA FLRSLLGSPA DFDRLMSLRV
DQVPEGETWV EGATLTATLI ALPGGEALLA CAVDRLRALP GSAPRLDQPL PVRDNLRCLE
LFDGFTRAFV EHATDLQPWD DAALQHEVRI LARQTSLQLC FTSPVRLLKA KALRGDAKGE
ARYCSEAAHL TPALLFARLH DTVADILRRH GHAPPPRLDL GPVPGQVLEA RWIDHGYRDG
AGRDQPMGGL LASLELQPDR LAPELLTLLA LGRHLGLGQR RSFGWGRYRL EDEWGIEQPV
GSDRPVGPAE PVAPADPVGA QTGDDIDWFG LDETPGSAEE IDWFGDMEAE NLPVALGQAA
AEGTQLLLAG EPARVGLDGG RLRVQRGEAE LLSAPLETLA GVTLLGPHQV STQLLGALLD
RGIPLALATG QGRLRGVLWN GVPGDAGPGL WMRQAACFED DARALEAARA VVDARLRQQR
EVLRNRMSPE RCDDLLPRLD RLIAKTAAAS DRASLNGLEG QAARLYFGAL AELLPPELGF
TGRNRRPPRD PFNVLLSLGY TVLHAHVDTV VRLNGLYPWR GFYHQPHGLH PALASDLMEP
FRHLVERVAL NVVARGRIRV SDFAQQGDAC RIEAGARRRY LADLSERLLT PVRARGDSEA
RSLHDHLHRQ ARSLIAWIRE EAPAFEPFRT R
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