Gene Tgr7_1788 details

Gene Information

• Locus tag: Tgr7_1788
• ID: 7317598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1905718
• End bp: 1906281
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643616680
• Product: RDD domain containing protein
• Protein accession: YP_002513857
• Protein GI: 220934958
• COG category: [S] Function unknown
• COG ID: [COG1714] Predicted membrane protein/domain

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0098202
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGGCA GGCATCATGT CATCCGAGGC CGAAACCTGT CCGGCACCGA CCGGGTCATG 
GCCAAGGCCC AAGGCAGTCA AAAATATCCA TATAAAAGGG AGAAACACCA CGTGAGCACT 
GAAAACATCA CCTATGCTGG CTTCTGGAAG CGCGTCGCCG CCTACCTGAT CGATGCACTG 
ATCCTGCTGA TTCCCAGCAT GATCCTGGGG GGCATCATCG GCTTCGTGGT GATGAGCGGG 
GTCACCGACT TCAGCGAAAT CGAGCCAGCC GCCGCTGGTG CCGAATTCCT GGCCCAGGTC 
GCGACGTTCA TCATGGCATG GCTGTATTTC GCCGTGATGG AGAGTTCCTC CTGGCGAGGC 
ACGCTGGGCA AACGCGCCCT TTCCATCCAG GTCAGCGACG CCAATGGTGA GCAGATCAGT 
TTTGGCAAGG CTTCCGGGCG GTTCTTTGCC AAGATTCTCT CCGGACTGAT CCTGCTGATT 
GGCTTCATCA TGGTCGCCTT CACGGCACGC AAGCAGGGTC TGCACGACAT GATCGCGGGC 
ACCCTGGTCA CCAACCGGGC CTAA 

 

Protein sequence

MVGRHHVIRG RNLSGTDRVM AKAQGSQKYP YKREKHHVST ENITYAGFWK RVAAYLIDAL 
ILLIPSMILG GIIGFVVMSG VTDFSEIEPA AAGAEFLAQV ATFIMAWLYF AVMESSSWRG 
TLGKRALSIQ VSDANGEQIS FGKASGRFFA KILSGLILLI GFIMVAFTAR KQGLHDMIAG 
TLVTNRA