| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1772 |
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| Symbol | |
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| ID | 7317582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1879189 |
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| End bp | 1881048 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643616664 |
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| Product | DNA helicase II |
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| Protein accession | YP_002513841 |
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| Protein GI | 220934942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3972] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGT TGATTCCATC ACTCAACAGT TGCCTTGGTC GCATGCAGGC CGGTGAGAAG
CGTTTTGCGC GTCGTCTCGA GAGTCATCTG GAAGATGACT ATCTCTGCTG GTACGAGATG
CCAGTGGGAC GGCGGCAACG ATATTCGGAC TTCATTGTCC TGCATCCCGC CCGTGGTCTT
CTGTTGCTCG AGGTCAAGGA CTGGAAGATG GAGACCATCC ACAGCCTTGA TAGAAGCAGC
GTAACCCTGC TGACGCCCAA TGGGTTGAAG ACCGCCAGCA ATCCCCTGGA ACAGGTGCGC
CAGTGCGCTT ACCAGCTGGT CAACCGTCTT GAAAGCGATC CGCAGCTGGT CAACCCCTCT
GGACGCTATC AGGGCAAGCT CTGCTTTCCT TATGGCTATG GTGTGGTCCT GACCCAGATC
AGCCGCGAGC AGTTCAATAG CAGTGGCATG GCTGAGGTCA TGCCAGAGCA CCAGGTGATC
TGCCGTGACG AGATGATGGA GAGCACTGAT CCGGAGGAGT TCCAGAAGCG TCTCTGGGAT
ATGTTCAATG TCAGCTTTGC GCGCCAGATG AGCCTTCCAC AGATCGACCG GGTGCGCTGG
CATATCTTTC CTGAGATCCG GATCGGGGAC GGTCAGGCGG GGTTGTTCGA CGAGACACCT
GCTGATGGGG CAGGGGGCGA GGAAGGCAAC TCAGCTGACG AACTGATTCC TGACCTGATC
AAAGTGATGG ACATGCAGCA GGAGCAGCTG GCCCGGAGTC TCGGCCAGGG GCATCGGGTC
ATCCATGGTG TGGCGGGCTC TGGCAAGACG CTGATTCTAG GGTACCGCTG CCTCTACCTG
GCCCGCCTTC TGCACAAGCC CATCCTCGTC ATCTGTTTCA ATATCACCCT GGCAGCCCGG
TTGCGCGGCA TGATGGAGGC GCAGGCCATC AACGATCGGG TCCACGTTTA CCACTTCCAC
GACTGGTGCG GTGAGCAGCT CAAGCGCTAC CACGTGCAGC GACCCGCACC GGGTGATCGT
TACCTGGAAG AACTGGTTGC CAGGGTGATC GAGGCCACTG ACAAGGGGCA GATCCCACGT
GGACAATACG GCGCCCTGAT GATCGACGAG GGCCATGATT TCGATGCCGA CTGGCTCAGG
CTGGTCGTTC AGATGGTCGA TCCCGACGAG GGGTCCCTGC TGCTGCTCTA CGATGATGCC
CAGTCCATCT ACAAGAAGAA CAGGGCACTT GATTTCAGCC TCTCCAGCGT CGGTATACAG
GCCCGTGGCC GTACCACGAT CCTGAAGCTC AACTATCGCA ACACCAATGA AATCCTCGAT
TTTGCCTACC GATTCGCCAA GCATTACCTG AACCCGACGG ACTCTGACGA GGACCATGTG
CCACTGGTCG AACCCCAGGC GGCTGGTCGC CATGGGCCAC CGCCGTATCT GAAGCTGTGT
TCATCTCTCG ATGAAGAGAT CCGCTACATC GCACACACGC TGTCACGGCT CAACCGTGAA
GGTGTCCTCT GGCGAGATAT GGCTGTCACC TGCCACTCCC GCAATCTTGC CAAGCAGCTT
ACAAAGGGAT TGGGCGCATC GGGTATACCC GTTGATAGTC TCGTGGAGTC CGTCGAGAAG
AAGGCCTTTG ACCCGGCCCG GGATAGCGTC AAGGTCATGA CGATGCACAG CAGCAAGGGT
CTGGAGTTCC CGGTTGTAGT CATTCCAGGG ATAGGGGGTC TGCCGGGTCA GTACGACGAT
CCTGCCTCGG ATGCGAAATT GCTCTATGTG GCCATGACCC GTTCAACGGA CAAGCTTCTG
CTGACCGCAA GCCAAGAGTC CGAGTTCGTT AAGCAACTCA TAGGAAATCA ATCCCGATGA
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| Protein sequence | MATLIPSLNS CLGRMQAGEK RFARRLESHL EDDYLCWYEM PVGRRQRYSD FIVLHPARGL
LLLEVKDWKM ETIHSLDRSS VTLLTPNGLK TASNPLEQVR QCAYQLVNRL ESDPQLVNPS
GRYQGKLCFP YGYGVVLTQI SREQFNSSGM AEVMPEHQVI CRDEMMESTD PEEFQKRLWD
MFNVSFARQM SLPQIDRVRW HIFPEIRIGD GQAGLFDETP ADGAGGEEGN SADELIPDLI
KVMDMQQEQL ARSLGQGHRV IHGVAGSGKT LILGYRCLYL ARLLHKPILV ICFNITLAAR
LRGMMEAQAI NDRVHVYHFH DWCGEQLKRY HVQRPAPGDR YLEELVARVI EATDKGQIPR
GQYGALMIDE GHDFDADWLR LVVQMVDPDE GSLLLLYDDA QSIYKKNRAL DFSLSSVGIQ
ARGRTTILKL NYRNTNEILD FAYRFAKHYL NPTDSDEDHV PLVEPQAAGR HGPPPYLKLC
SSLDEEIRYI AHTLSRLNRE GVLWRDMAVT CHSRNLAKQL TKGLGASGIP VDSLVESVEK
KAFDPARDSV KVMTMHSSKG LEFPVVVIPG IGGLPGQYDD PASDAKLLYV AMTRSTDKLL
LTASQESEFV KQLIGNQSR
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