Gene Tgr7_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1731 
Symbol 
ID7315753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1830442 
End bp1831650 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID643616622 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002513800 
Protein GI220934901 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TGATCCTCCC CGCCCTGCTC CTCGTCGCCT TTGCCACTGT CCTATGGTGG 
CTCAATGCCC CCGAGACCCC CGATGCCTCG GCGCCGGGCG CCGCGCCCGG CGCCGTGCAG
GGTTCCTCGC GGGCGGTGGC GGTCACGGTG GCGGAGGTAG AGAGCCGGGA GATGCGCGAG
GTGCTGCGCT TTACCGGTTC CCTGGTCGCC GCCAGCCGGG TGGAGATCAC ACCCCGCGTG
GCGGGACGGC TTGACCGCGT GTTCGTGGAT ATCGGCGACA CCGTGCGCCG GGGTGATCTG
CTGGCGCGAC TGGACACCGA TGCCTTCGAG CAGGAATTGC AGCAGTCCCG GGCTGAGCTG
GCGGTGGCCC GTGCCGGGCT GGCCGAGGCG GAGGCCTCCC TGGAGGCGGC GCGGCGCGCC
CTGGTGCGCA CCCGGGAACT GCGTGCCCAG CGGGTCGCTT CACAGTCGGA ACTGGAGGCG
GCAGAGACCG AGGTCCAGGC CCAGGCGGCA CGTCTGGAGC TGGCCCGTTC CCAGATCCAG
CAACGGGAGG CGGCCCTGGC CGGGGCGCAG ATCCGCTTGT CCTACACGGA GTTGCGTGCC
CAGTGGCACG GCGATGACAC CGAGCGCCTG GTGGCCGAAC GTTACGCCGA CGAGGGCGTC
ATTCTCCAGG CCAACAGCCC AGTGCTGGCC CTGGTGGAGC CCAATCCCCT GCGCGCGGTC
GTGTTCGTCA CCGAGCGTGA CTACGCGCGT CTTGCCCCGG GGCAGGAGGC GATCCTGCGT
GCCGAGGCCT ATCCCGGAGA GCGATTCACC GGCGCACTCT CCCGGCTTGC GCCGGAGTTC
CGTGAGACCT CGCGGCAGGC GCGGGTGGAG ATCAGCGTGC CCAATGATGA ATTGCGCCTG
CGACCGGGTA TGTTCGTGGA GGCCAGCATC CAGGTGAGCC GCGTCGAGAA TGCCACGGTC
GTGCCCCTGG ACGCCCTGGT GGAACGGGAG GGGGCGCCGG GTGTGTTCCT GCTGGATGAA
TCCGGCGAGG CGCCCCTGGC GCGCTTCGTG CCGGTGGGCA CGGGGGTGCG TGAGGGCGAC
TGGGTGGAGA TCCGCAGTCC CGAGCTGCAA GGCCGTGTGG TGACCCTGGG CCATCACCTG
CTCAGTGACA GTGGCCGGGT GCGCGTGGTG GACGCCGAGC AGGTGGACGG CCGGGGCGCC
CGTCGATGA
 
Protein sequence
MNKLILPALL LVAFATVLWW LNAPETPDAS APGAAPGAVQ GSSRAVAVTV AEVESREMRE 
VLRFTGSLVA ASRVEITPRV AGRLDRVFVD IGDTVRRGDL LARLDTDAFE QELQQSRAEL
AVARAGLAEA EASLEAARRA LVRTRELRAQ RVASQSELEA AETEVQAQAA RLELARSQIQ
QREAALAGAQ IRLSYTELRA QWHGDDTERL VAERYADEGV ILQANSPVLA LVEPNPLRAV
VFVTERDYAR LAPGQEAILR AEAYPGERFT GALSRLAPEF RETSRQARVE ISVPNDELRL
RPGMFVEASI QVSRVENATV VPLDALVERE GAPGVFLLDE SGEAPLARFV PVGTGVREGD
WVEIRSPELQ GRVVTLGHHL LSDSGRVRVV DAEQVDGRGA RR