| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1726 |
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| Symbol | |
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| ID | 7315748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1821913 |
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| End bp | 1824249 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643616617 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_002513795 |
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| Protein GI | 220934896 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.597451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCAA TACAGCGGGG CCTGTTATTG ATGATGGTGC TGTTCCTGAC CACATCTGGC
TCGCTGGCCT CAGCTGAGAC CGTGCGTATC CAGCTCAAGT GGTTTCATCA GTTTCAGTTT
GCTGGCTATT ACGCCGCCCT GGAAAAAGGC TATTTCGCCG AGGAAGGCCT GCAGGTCGAG
CTGATCGAAC GGGACATCAG CCGCAACAAC ATCCAGCAGG TTCTTGCGGG CGAAGCCGAG
TACGGCATCG CCGATTCCGC CATCCTGCTC TATCAGCAAC AGGGCGCCCC GCTGCGTATC
GTGGCCCCGA TCTTCCAACA CTCGCCCAAT GTGATCGTGA CCCGGGCCGA TTCGGGGATC
CTCTCACCAC AGGATCTGGT CGGCCGGCGG GTGCGCCTCT ACAACAACGA GACCGACGGT
TTCCCGATCA TGGCGATGCT CGCCGAACAA GGGGTATTGG CCCAGGGAGT GATTCGCCAA
CCCTACAGTC CGGATCTCGA GGCGCTGATT CGTAACGAAA CGGATGCCAT TTTCGCCTAC
AGCAGCAATG AACCCTTCCA GCTGCGTGAG AAAGGTCTGG ACGTGCGCAT CATCCATCCC
GCGCATTACG GCATCGATAT GTACGGGGAC ATGCTGTTCA GCTCGGAGTC CGAGGCAATA
CAGCATCCAG AGCGTTTGCA GGCGATGCGT CGGGCGGTAT TGCGCGGGTG GGAGTATGCC
CTGGACAACA AGCTGGAGAT CGCCCAACTG ATACGGGAGA AATACAGCCA GCGAAAATCC
CTGGCCGCCC TGATGTTTGA AGCCCATGCC ATCGAGCAGG CGGTAGATCG TTTCGCCGTG
CCGCTCGGCA CACTCGACAG TGGACGACTC CAGTACATCG CCGGCATCTA CCAGCGTCAC
GGCCTCCTGG ATGATCATTT TCGCGTCGAT CGACGCATGT ATTTCGATCG CGCTGCCGGC
GAAGGCAGCA ACCTCACAGA CGAAGAAAGT CTCTTCCTGG ATCAGAACGA CGTGATTCGT
GTAGCGGTCG ACCCAAGCTG GTATCCCATG GAATTCGTGG ATGAATCCGG TCAGCACGGA
GGGATCGCCG CGGATTACCT GGCATTGCTG TCCCAGCGCC TGGGAATCAG GTTTGAAATC
GCGCAAGGGG TCTCGTGGGC CGATGCCGTG ACGATGGTGC GTGAACGCGA ACTGGACATG
TTCGCCATGG CTGCGCGAAC CCCGGAACGT GATCATTTTG CCTTGTTCAC CCAGCCCTAC
ATCCGCTCAC CCATGGTCAT CGTCACCGAC ATGGGAGTGG ATTACATTGA CAGCCCCGTG
CGACTGCATG GCAAAAAGGT GGCCGTGGTC AGGGGTTACG CCTCGCACGA ATGGCTGGCA
AGCAATCAAC CGGAGATCCC TTTACGCTTG GTGGACACCA CGGTCGAGGG ACTGGAGCGC
GTCGCCACGG GCGAGGTTTA TGCCCTTGTC GATAACCTCG CTTCAGTGAC TTTTCTGATC
AAGCAACGTG GCTTGTCCAA CCTCAAGGTA TCGGGCCAGT TGCCGCTGGG CTTCGATCTG
GCCATGGGCG TGCGCAGCGA CTGGCCTGAG TTGCGCACCA TCCTGCAAAA GGGTCTGGAT
GCGATCAGCC AGGAGGAACG GGACGCCATC TACGACAAGT GGGTGCGTCT GGAGGTGGAA
ACCCGCCCCG ACCTGAGCAA GGTAGCGCCC TACTTCATCG CCCTGCTGCT GATACTCGCC
CTGGTCAGCC TGGATGCCTG GCGAGTGCGT CGCTTGCACC GACGCTTGCA AGAGGCCAAT
CGACAACTAC ATCTGGCCGA GCAGCGCCTG ATCGAGCAAA ACCATCAACT GGAACTGCTA
TCGATTACCG ACAAACTGAC CGGGGCCTAC AACCGTCTCA AACTCGATGA AGTCCTGCAA
CAGCAGCACG CCCTGGCCGA GCGCTATAAA CGACCAGTTT CGGTGGTGAT GTTTGACCTG
GATGATTTCA AACGTGTCAA CGACACTCAC GGACACCATG CCGGCGATCT GATCTTGCGG
CGCTTTACCG AACTTGTGTT GAGCCTTGCA CGCAAAAGCG ATGTGTTCGG GCGCTGGGGT
GGCGAGGAAT TCTTACTGAT CTGTCCGGAA ACCACCGCCT TGGATGCGGC CGACCTGGCC
AACAGGGTGC GTGTGCAACT GGCCGAAATC GTCTTTGAAG AAGTCGGCAC CCAGACTGTC
AGTTCTGGTA TCGCAGAGTT ACGGCCGTCG CAATCTGTGA ATGACTGGAT CAGCCATGCG
GACAAGCGTC TGTATCAGGC CAAGCAGCAG GGGCGTAACC GGGTTGTCAG TAACTGA
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| Protein sequence | MRAIQRGLLL MMVLFLTTSG SLASAETVRI QLKWFHQFQF AGYYAALEKG YFAEEGLQVE
LIERDISRNN IQQVLAGEAE YGIADSAILL YQQQGAPLRI VAPIFQHSPN VIVTRADSGI
LSPQDLVGRR VRLYNNETDG FPIMAMLAEQ GVLAQGVIRQ PYSPDLEALI RNETDAIFAY
SSNEPFQLRE KGLDVRIIHP AHYGIDMYGD MLFSSESEAI QHPERLQAMR RAVLRGWEYA
LDNKLEIAQL IREKYSQRKS LAALMFEAHA IEQAVDRFAV PLGTLDSGRL QYIAGIYQRH
GLLDDHFRVD RRMYFDRAAG EGSNLTDEES LFLDQNDVIR VAVDPSWYPM EFVDESGQHG
GIAADYLALL SQRLGIRFEI AQGVSWADAV TMVRERELDM FAMAARTPER DHFALFTQPY
IRSPMVIVTD MGVDYIDSPV RLHGKKVAVV RGYASHEWLA SNQPEIPLRL VDTTVEGLER
VATGEVYALV DNLASVTFLI KQRGLSNLKV SGQLPLGFDL AMGVRSDWPE LRTILQKGLD
AISQEERDAI YDKWVRLEVE TRPDLSKVAP YFIALLLILA LVSLDAWRVR RLHRRLQEAN
RQLHLAEQRL IEQNHQLELL SITDKLTGAY NRLKLDEVLQ QQHALAERYK RPVSVVMFDL
DDFKRVNDTH GHHAGDLILR RFTELVLSLA RKSDVFGRWG GEEFLLICPE TTALDAADLA
NRVRVQLAEI VFEEVGTQTV SSGIAELRPS QSVNDWISHA DKRLYQAKQQ GRNRVVSN
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