| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1696 |
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| Symbol | |
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| ID | 7315718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1795496 |
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| End bp | 1798387 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616588 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_002513766 |
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| Protein GI | 220934867 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGC GTCTGCCGGC ACGGGACGGG GAGTGGATCG ACCGCTCGCG CACCCTGCGC
TTCAGCTTCG AGGGACGCGA GTACAGCGCG TTTGCGGGCG ACACCATCAG CTCTGCGCTG
CTGGCCAATG GCGTGCGCGT GCTGGGACGC AGCTTCAAGT ACCACCGGCC CCGGGGCGTG
TTCTCGGCGG CCAACCACGA CAGCAACGTG CTGCTGCAGT CGGACTCCGA TTTCAACATC
CGTGGCGACG TCACCGCCGT TGCAGACGGC ATGCGGCTCA GCGCCATCAA CACCCAGGGC
GGCCTGGACA AGGACCGGGG CCGGTTCCTG GACAGGCTCT CGCCCCTGCT GCCGGTGGGC
TTCTATTACA AGACCTTCCA CCGCCCCAAG GCGCTGTTCC CCTTCTGGGA GAACCAGATC
CGCAAGCGGG CGGGACTCGG GCGTATCGAC ACCCAATGGC CCGAACTGCG CCTGCCCAAG
CGCCACGGCT TCTGCGACCT GCTGGTGGTG GGCGCGGGTC CCTCGGGCCT GAGCGCCGCG
ATAGCTGCCG CGGAAAGCGG CGCCCGTGTC TGGCTGGTGG ATGAGAACGC CCGCGCCGGC
GGCAGCCTCA ACGACCGGCA GGACGGCGCG CTGCGCGATC AACTGCTCGC GCGCCTGGCG
GATCTCCCCA ATCTCACCTT CCTGCCGGAC ACCGTCGCCG CCGGCTGGTA CGCGGATCAC
TACGTGCCCC TGGTCACACC GAAGGGCCTC ATCCGCCTGC GCGCCCGTGC GGTCATCGTG
GCCGGCGGCG TCTACGAGCA GCCCGCGGTG TTTCGCAACA ACGACCTGCC GGGCGTGATG
CTCGCGAGCG CGGCCCTGCG GCTCGCCCGC CGCTACGGCG TAGCCGCCTG CGAGTCCGCC
GTGATCCTCG CCGCCAACAG CGATGCCTAC CGCAACGCCC TGGAACTGAA GGCGCTCGGC
ATCCCCGTCA AGGCCATCGT GGACCTGGAC GCCCCCGAAA CGCGGGGCGA TCTGCACGAT
CAGGTACGGG CCGCGGGCAT CGCCGTCCAT GGCCGCAGCA CCGTCTACAG CGCCGAGGGC
GAGGGCCTGC TCCAGGCCGT CACCGTCTGC GCCCTGGATG CCGAGGGCAG GGCGAAACCG
GAGACCGCCC AGCGCATCGA CTGCGACGGC CTGCTCATGT CCGTGGGCTA CGCACCCGCC
GCCCCGATCC TCTACCAGTC TGGCACCCGC ATGGTGTTCG CCGAGATCCC GGGCCAGTTC
GTGCCGGAAC AGTTGCCACC CGGGGTCTTC GCCTGCGGCC GGGTCAACGG CGTGTTCGAT
CTCGATGCCC GCGTGGCGGA CGGCGCCGCC GCCGCCGGCG AGGCGCTGGC ACACCTGGGC
ATGCAGGCAG GGCCCACCGC GCGGCCCGGG CGCAGCAGTG AACGCATGTC CCATCCCTGG
CCCGTGTTCC CCCACCCCAA GGGCAAGAAC TTCGTGGACC TGGACGAAGA CCTGCAACTC
AAGGACCTGG AGCGTGCGGC GGCCGAAGGC TTCGACAACA TCGAACTGCT CAAGCGCTAC
TCCACCGTGG GCATGGGCCC CAGCCAGGGC AAGCACGCCA ACATGAACGC CGTACGCATC
CTGGCACGCC TCAACAAGCA GTCCATCGGC GCGACCGGCA CCACCACGGC GCGTCCTTTC
TACCATCCCG TGCCCATCAA GCACCTGGCG GGCCGACGCC TGCGTCCGGA GCGGCGCACG
CCCATGCACG GCTGGCACCG GGATCACGGC GCGGTGTTCA TGCCCGCCGG CCACTGGCAG
CGCCCCAAGT ACTACGGACC CGCATCGGAG GCGGAGGCCA TCCGTGCCGA GGTGATGGCG
GTGCGCGAAG GGGTGGGGCT CATCGATGTC TCGACGCTCG GCAAGGTGGA GGTGTTCGGC
CCCGACGCCG CACGCTTCAT GGACCAGCTC TATACGCTGA AGCTCTCCAC CGTGAAGCAG
GGCATGACCC GCTACGCGCT CATGGTGGAC GAGGCGGGCG TGGTCATCGA CGACGGGGTG
TGCGCCCGCT GGGGCGAGGA GCATTTCTAC GTCAGCACCA CCACCACCGG CGCCGAGGCC
ATCTTCCGCC AGATGCAGCG GATGATCGGC GAATGGAACC TCAAGGTGGA CGTGGTCAAC
CGCACCAGCC AGCTGGCCTC CATGAACATC GCAGGCCCCC TGACCCGCGA TGTGCTGCAG
CCGCTCACCG ACGTGGATCT CTCCCAGGCC GCGTTCCCCT TCCTCGGCGC GCGCCAGGGG
AGGGTGGCGG GCGTGCCCGC CTGGCTGTTC CGGGTCGGCT TCGTCGGTGA ACTGGGCTTC
GAGATCCACG TGCCCGCCGC CCAGGCGCTG CACGTGTGGG AGGCGCTCAT GGAGGCGGGC
GCGTCCAGGG GCATCCGGCC CTTCGGCGTG GAGGCACAGC GCCAGCTGCG CCTGGAGAAG
GGCCACCTGA TCGTGGGCCA GGACACCGAC GGCACCTCCA GCCCCTTCGA CGCCAACATG
GCCTGGGCGG TGAAGTTCGA CAAGCCCTTC TTCCAGGGCA AGCGCAGCCT GCAGATCCTG
AAAGAGCGCG CCGCCAACCG CCTGGTGGGC TTCCGCCTGC CGGGCAGCCA TCCGGGCCCG
ATTCCCAGGG AATGCCACCT GGTGATCCAC GACGACGACA TCGCCGGCCG GGTCACCAGC
ATCGGCTACA GCCCGAGCCT CAAGGCCTGG GTGGGGCTCG CCATGGTGGA CAAGACGCTG
GCCGATGCGG CGCAGCTCTC CATCCGCGTG GAAGGCGCGG TGATCATCCA GGCCGACGTG
GTGCCCACGC CCTTCTACGA CCCGGAAGGT CTGCGCCAGA AACCGGAAAC GGCCGGGGAG
GTGAACGCAT GA
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| Protein sequence | MAKRLPARDG EWIDRSRTLR FSFEGREYSA FAGDTISSAL LANGVRVLGR SFKYHRPRGV
FSAANHDSNV LLQSDSDFNI RGDVTAVADG MRLSAINTQG GLDKDRGRFL DRLSPLLPVG
FYYKTFHRPK ALFPFWENQI RKRAGLGRID TQWPELRLPK RHGFCDLLVV GAGPSGLSAA
IAAAESGARV WLVDENARAG GSLNDRQDGA LRDQLLARLA DLPNLTFLPD TVAAGWYADH
YVPLVTPKGL IRLRARAVIV AGGVYEQPAV FRNNDLPGVM LASAALRLAR RYGVAACESA
VILAANSDAY RNALELKALG IPVKAIVDLD APETRGDLHD QVRAAGIAVH GRSTVYSAEG
EGLLQAVTVC ALDAEGRAKP ETAQRIDCDG LLMSVGYAPA APILYQSGTR MVFAEIPGQF
VPEQLPPGVF ACGRVNGVFD LDARVADGAA AAGEALAHLG MQAGPTARPG RSSERMSHPW
PVFPHPKGKN FVDLDEDLQL KDLERAAAEG FDNIELLKRY STVGMGPSQG KHANMNAVRI
LARLNKQSIG ATGTTTARPF YHPVPIKHLA GRRLRPERRT PMHGWHRDHG AVFMPAGHWQ
RPKYYGPASE AEAIRAEVMA VREGVGLIDV STLGKVEVFG PDAARFMDQL YTLKLSTVKQ
GMTRYALMVD EAGVVIDDGV CARWGEEHFY VSTTTTGAEA IFRQMQRMIG EWNLKVDVVN
RTSQLASMNI AGPLTRDVLQ PLTDVDLSQA AFPFLGARQG RVAGVPAWLF RVGFVGELGF
EIHVPAAQAL HVWEALMEAG ASRGIRPFGV EAQRQLRLEK GHLIVGQDTD GTSSPFDANM
AWAVKFDKPF FQGKRSLQIL KERAANRLVG FRLPGSHPGP IPRECHLVIH DDDIAGRVTS
IGYSPSLKAW VGLAMVDKTL ADAAQLSIRV EGAVIIQADV VPTPFYDPEG LRQKPETAGE
VNA
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