| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1672 |
|---|
| Symbol | |
|---|
| ID | 7316985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1770908 |
|---|
| End bp | 1772542 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643616564 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002513742 |
|---|
| Protein GI | 220934843 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC TACCCATTGG CATTCGTCTC ACCATCGGGT TCGGCCTGCT GGTCCTCCTG
ATGGTCGCCC TGGCACTGGG CGCTTGGCTG CAGTACAGCG CGGTGCGCGC TTCGGTGGCG
CTGAATCAGC ACACTTACAC CGTGATCCTG GATGCCGAGC AGATGCTCAT GGGACTGGTG
AACATGGAAA CCGGCCAGCG CGGTTACCTG CTCTCTGGTG ATGAAGAAAA ACTCGCTGTC
TATCGAGAAG GCCAGGAGGA GTTCAGCCAG GAACTCGCCA CCCTGCGCCG CCTGACTGCG
GACAACCGTG CACAGCAGGC TCGACTCGAT GCTGTCGCAC AGCGCTACGA CACCTGGGTC
CGGCAGCACC TGGAGCCGGC CATTGAATTG CGCAGGGCCA ATCCGGAGAT CAGCGGTGCA
CTGATGCGGC AACTGTCGGA CATGACCGAC GCTGCCCGAA ACTACATGGA TACCCTGCGA
GAGATCATTC ACGAGATCGA GTATGAAGAA CACAGACTAC TTGAACAGCG CTCCGCAGGC
CTGGAGCGCA ACGACAGCAT GCTCCAGGGA ATCCTGCTGT TCGGTACCCT GCTGGGCATC
CTGCTCGCCG TTCTGGCCGC CTGGTTCATC ACCCGCAGCG TGGTCGTACC CGTGCGACAG
GCGGTCGGAC TGGCGGAGAG GCTCTCCGAA GGGGATCTGA CAGCACAGGT CAACTCGATC
AGCCGTGATG AAACCGGACA GTTGCTGACC GCCCTTGACC GGACCACCCA GCGCCTGCGA
GAGATGATCG GCAACATCGG CAGCAGCGCC TCCCAGTTGG CCGCGGCCAC CGAGCAGATG
TCCGCGGTCT CTCAACAGAC CCGGGCCGGC GCCAACCGGC AGCAGGGGGA AACGGCGCTG
GTGGCTACAG CCATCACCCA GATGAGCAGT TCCGTCCAGG AGATCTCCCG CAACACCCAG
AGCGCCAGTG ATTCCGCAGG CGCCGCCAAT CGGCGCGCCG ACGATGGCCG CCGGGCCATG
GACGAGAATA CCCGGGGCAT GGAAGTCCTG GCCGAAGAAC TGCTCAATGC CAGCCGCGTG
ATCGAGGACG TGAACGGTCA GAGCGAATCC ATCGGCACCG TCCTCGACGT GATCCGGGGC
ATCGCCGAGC AGACCAACCT GCTGGCGCTC AACGCCGCCA TCGAGGCCGC CCGCGCCGGG
GAACACGGCC GCGGTTTTGC CGTGGTCGCC GACGAGGTGC GCAGCCTGGC CAATCGCACC
CAGGATTCCG TCGGTGAGAT CGAGTCCATG ATTGACAAGC TGCAGAAGGG TGCCCGGGAA
GCCGTGAACA TGATGGGCCG CAGTGGCGAG AGTGCCGCCC AGAACCTGGA GCGCACTCGC
AACACGCAGC GCTTGCTGGA GGAGATCGTC GCCGCGGTGC AGACCATCAG TGACATGACC
ACCCAGGTCG CCAGCGCGGT TGAGGAGCAG ACCGTGGTGG CCGATGACAT CAACCGCAAC
GCCGTGAGCA TCAAGCAGGT GGCCGACGAG ACCGCAGATG CCATCAGCCA GGTCGACGCC
GCCAGCCTGG AACTGTCCCG CCTGGCCGCA TCGCTCACCG GCATGGTCTC CCGGTTCAGA
CTGCAGGCTG CCTAG
|
|---|
| Protein sequence | MNNLPIGIRL TIGFGLLVLL MVALALGAWL QYSAVRASVA LNQHTYTVIL DAEQMLMGLV
NMETGQRGYL LSGDEEKLAV YREGQEEFSQ ELATLRRLTA DNRAQQARLD AVAQRYDTWV
RQHLEPAIEL RRANPEISGA LMRQLSDMTD AARNYMDTLR EIIHEIEYEE HRLLEQRSAG
LERNDSMLQG ILLFGTLLGI LLAVLAAWFI TRSVVVPVRQ AVGLAERLSE GDLTAQVNSI
SRDETGQLLT ALDRTTQRLR EMIGNIGSSA SQLAAATEQM SAVSQQTRAG ANRQQGETAL
VATAITQMSS SVQEISRNTQ SASDSAGAAN RRADDGRRAM DENTRGMEVL AEELLNASRV
IEDVNGQSES IGTVLDVIRG IAEQTNLLAL NAAIEAARAG EHGRGFAVVA DEVRSLANRT
QDSVGEIESM IDKLQKGARE AVNMMGRSGE SAAQNLERTR NTQRLLEEIV AAVQTISDMT
TQVASAVEEQ TVVADDINRN AVSIKQVADE TADAISQVDA ASLELSRLAA SLTGMVSRFR
LQAA
|
|---|
| |