| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1543 |
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| Symbol | rpsA |
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| ID | 7316167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1656650 |
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| End bp | 1658326 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643616434 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002513614 |
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| Protein GI | 220934715 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.49794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GTTTCGCGCA ACTGTTCGAA GAGAGCATGG CCTTCACGCA GATGAAGCCA
GGCAGCATCA TCAACGGCAC CGTCATTCAC GTGACGCCCG ACGTGGTGGT GATCAACGCA
GGTCTGAAGT CTGAAGGCGT GGTCCCCGCC GACCAGTTCC TCAACGAAAG AGGGGAAATG
GAAGTCAAGG TGGGCGACGT GGTCGAGGTG GCTCTCGAGA GCCCCGAAGA CGGCTTCGGT
GAAACCCGTC TGTCCCGCGA GAAGGCCAAG CGCGCGAAGG CCTGGGAACG CCTGGAAACC
GCCATGGAAA GCGACCAGAC CATCACCGGC ATGATCTCCG GCAAGGTCAA GGGCGGCTTC
ACCGTGGAAC TCGGCGACAT CCGCGCCTTC CTTCCCGGTT CCCTCGTCGA TGTGCGCCCG
GTGCGCGACA CCGCCTACCT GGAAGGCAAG GAGCTGGAGT TCAAGCTCAT CAAGCTCGAC
CAGCGCCGCA ACAACGTCGT TGTCTCCCGC CGCGCCGTGG TGGAGAAGGA ATACAGCGCC
GAGCGCGACG AACTGCTCAA GAACCTGCAG GAAGGCATGG TGCTCAAGGG CATCGTCAAG
AACCTCACCG ACTACGGTGC GTTCCTGGAC CTGGGCGGCA TCGACGGCCT GCTGCACATC
ACCGACATGG CCTGGAAGCG CGTCAAGCAT CCCTCCGAGG TGGTGGAGAT CGGTCAGGAG
ATCGAGGTCA AGGTGCTCAA GTTCGACCGC GAGCGTAACC GCGTATCCCT GGGCCTGAAG
CAGCTGGGCG ACGACCCGTG GGAGAACATC ACCCGTCGTT ACCCCATCGG CTCCCGCCTG
TTCGGCAAGG TCACCAACAT CACCGACTAC GGCTGCTTCG TGGAAATCGA AGACGGCGTG
GAAGGCCTGG TGCACGTGTC CGAGATGGAC TGGACCAACA AGAACATCGC CCCCAACAAG
ATGGTCGCCG TGGGTGACGA GGTCGAAGTG ATGATCCTCG ACATCGACGA GGAGCGTCGC
CGCATCTCCC TGGGCATCAA GCAGTGCAAG GCCAATCCCT GGGACGAGTT CGCCGCCACC
CACAACAAGG GTGAGAAGGT CTCCGGCGTG ATCAAGTCCA TCACCGACTT CGGCATCTTC
GTGGGCCTGG ACGGTGGCAT CGACGGCCTG GTGCACCTCT CCGACCTGTC CTGGAACATG
GAAGGCGAAG AGGCCGTGCG CAACTACAAG AAGGGCGACG AGATCGAGGC CGTGGTGCTG
GCCGTGGATC CGGAGCGCGA GCGCATCTCC CTGGGCGTGA AGCAGCTGGA CAAGGACCCC
TTCTCCAACT TCGTGGCCGA ACACGCCAAG GGCAGCATCG TCAAGGGCGT GGTCAAGGAA
GTGGACGCCA AGGCCGCCAT CGTGGAGTTG GCCGACAGCG TGGATGGCGT GCTGCGCGCC
TCCGAACTGT CCCGCGACCG CGTGGAAGAC GTGCGTTCTG TGCTCAACGT GGGCGATACG
GTGGAAGCCA AGTTCATGGG CGTGGATCGC AAGAACCGCA CCGTGACCCT GTCCATCAAG
GCGAAGGATT ACGCCGAGGA AGCCGAGGCG CTGCAGGACT ACAGCAGCAG CTCCGGCTCC
GCCACCACCT CCCTTGGGGA TCTCCTCAAG GAGCAGATGG GCTCCAAGGA CAAGTAA
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| Protein sequence | MSESFAQLFE ESMAFTQMKP GSIINGTVIH VTPDVVVINA GLKSEGVVPA DQFLNERGEM
EVKVGDVVEV ALESPEDGFG ETRLSREKAK RAKAWERLET AMESDQTITG MISGKVKGGF
TVELGDIRAF LPGSLVDVRP VRDTAYLEGK ELEFKLIKLD QRRNNVVVSR RAVVEKEYSA
ERDELLKNLQ EGMVLKGIVK NLTDYGAFLD LGGIDGLLHI TDMAWKRVKH PSEVVEIGQE
IEVKVLKFDR ERNRVSLGLK QLGDDPWENI TRRYPIGSRL FGKVTNITDY GCFVEIEDGV
EGLVHVSEMD WTNKNIAPNK MVAVGDEVEV MILDIDEERR RISLGIKQCK ANPWDEFAAT
HNKGEKVSGV IKSITDFGIF VGLDGGIDGL VHLSDLSWNM EGEEAVRNYK KGDEIEAVVL
AVDPERERIS LGVKQLDKDP FSNFVAEHAK GSIVKGVVKE VDAKAAIVEL ADSVDGVLRA
SELSRDRVED VRSVLNVGDT VEAKFMGVDR KNRTVTLSIK AKDYAEEAEA LQDYSSSSGS
ATTSLGDLLK EQMGSKDK
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