| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1538 |
|---|
| Symbol | |
|---|
| ID | 7316565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1651118 |
|---|
| End bp | 1652206 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643616429 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_002513609 |
|---|
| Protein GI | 220934710 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AGGAATCACT GGAACAGATC CGGGCGCGCA TCGATGCCCT GGACGATGAA
CTGCTCAGGC TGATCAGCGA GCGGGCCCGC TGTGCCCAGG CGGTGGCCAA GGTCAAGCGC
GACGCGGATC CCAACGCCGA GTTCTATCGT CCCGAGCGCG AGGCGCAGAT CCTGCGCAAG
ATCCAGCAGC GCAATCCAGG CCCTCTGGAT GCCGAGGAGA TGGCGCGCCT GTTCCGGGAG
ATCATGTCCG CCTGCCTCGC CCTGGAAGAA CCCCTCAACG TCGCCTTCCT GGGTCCCGAG
GGCACTTTCA CCCAGGCGGC GGCCCTCAAG CACTTCGGCC ACTCGGTGCA CACCGTGCCC
CTGGGTGCCA TCGACGAGGT GTTCCGGGAG GTGGAGTCCG GCGCCGCCCA TTACGGCGTG
GTGCCGGTGG AAAATTCCAC CGAGGGCGTG GTCACCCACA CCCTGGACCG CTTCATGCAG
TCGCCGCTCA AGATCTGCGG CGAGGTGGCC CTGCGCATCC ATCATCACCT GATGGCGAAA
CCCGGCCTCG CCCGGGAACA GGTCAAGCGC ATCTATTCCC ACCAGCAGTC TCTCGCCCAG
TGCCGGGAGT GGCTGGACGC CAACCTGCCC CAGGCCGAGC GCATCCCGGT GAGCAGCAAC
GCCGTGGCCG CGCGGCGTGC CGCCGAGGAG GAGGGCGCCG GTGCCATCGC CAGCCAGGCG
GCCGCCGAAC GTTACGTGCT CAATGTCCTC AACGCCAACA TCGAGGATGC CCCGGACAAC
ACCACCCGTT TCCTGGTGAT TGGTCAGCGG GCCAGCGGGC CGTCAGGCCG GGACAAGACT
TCCCTGCTGC TGTCCACCCG AAACCGCCCC GGTTCCCTGT ACCGCCTGCT GGAGCCCTTC
GCCCGCGCGG ACGTGAGCCT GACGCGCATC GAATCCCGTC CCTCCCACTG CGTGAACTGG
GATTACGTGT TCTTCATCGA CGTGGAAGGT CACGAGGAAG ACGACAAGGT GCGCCAGGCC
ATCGCGGCCC TGGAACAGGA AGCGGATCTG GTCAAGGTGC TGGGGTCCTA TCCCAGAGCG
GTGCTTTGA
|
|---|
| Protein sequence | MSEQESLEQI RARIDALDDE LLRLISERAR CAQAVAKVKR DADPNAEFYR PEREAQILRK
IQQRNPGPLD AEEMARLFRE IMSACLALEE PLNVAFLGPE GTFTQAAALK HFGHSVHTVP
LGAIDEVFRE VESGAAHYGV VPVENSTEGV VTHTLDRFMQ SPLKICGEVA LRIHHHLMAK
PGLAREQVKR IYSHQQSLAQ CREWLDANLP QAERIPVSSN AVAARRAAEE EGAGAIASQA
AAERYVLNVL NANIEDAPDN TTRFLVIGQR ASGPSGRDKT SLLLSTRNRP GSLYRLLEPF
ARADVSLTRI ESRPSHCVNW DYVFFIDVEG HEEDDKVRQA IAALEQEADL VKVLGSYPRA
VL
|
|---|
| |