| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1501 |
|---|
| Symbol | |
|---|
| ID | 7317988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1607961 |
|---|
| End bp | 1611836 |
|---|
| Gene Length | 3876 bp |
|---|
| Protein Length | 1291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643616392 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_002513572 |
|---|
| Protein GI | 220934673 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTC TGCCTGGGGC GCCCGCCCTG TCCGATTTCC GTCTGGAGCG CCTGCTGGGT
CAGCTCCGGG AGACCGAACC CACGATCCAG GGTCTGGACG CCCGGTTCGT CTATTTCGTG
GATCTCGAGC GGGCCCTGAC CACGGCGGAG CAGGCGGTTC TCGAGGCCCT GCTGGAGACG
GCGGGCACAG CCCCTGCGGA GACGGCGGAC TTCCTGGTGG TGCCACGCCT GGGCACTGTC
TCCCCCTGGT CCAGCAAGGC CACCGACATC GCCCACCATT GCGGCCTGGA CGGCGCAGTG
CGGCGCATCG AGCGGGGCAT CAGCTACCGC CTCAAGTCCG GCAAGGCGCT GGACATCCCC
GGCAGGCGGC GCCTGGCCGG TCTGCTGCAC GACCGCATGA CCGAGACCGT GCTCCTGGAT
CCGGCCGACG CGGAGCGGCT GTTCGTGCAT CACGAGCCGG CCCCGGTGAC GGTGATCGAG
CTGGGCGACG ACGCCCGGGG CGCCCTCGAG CGGGCCAACG CCGAGATGGG GCTGGCCCTG
TCCGGGGAGG AGATCGACTA CCTGGCGGAG GCCTACGGCG CCCTGGGGCG GGCACCCACG
GATGTGGAAC TGATGATGTT CGCCCAGGCC AACTCCGAGC ACTGCCGGCA CAAGATCTTC
AACGCCGACT GGGTGATCGA CGGCGAGGCG AAGGAAAAAT CCCTGTTCGC CATGATCCGC
AACACCTACC ACCACGCGCC CCAGGGCATC CTGTCCGCCT ACCGGGACAA TGCCGCCGCC
ATGGAAGGGG CCCGGGGCCG GCGTTTCATG CCGGATCCGG AGTCGGGCGA GTACCGGGCG
GAGGAGATGG ACCTGCCCAT CATCATGAAG GTGGAGACTC ATAACCATCC CACGGCCATC
TCGCCCTTCC CGGGGGCCGC CACCGGCGCC GGCGGCGAGA TCCGCGACGA GGGGGCCACG
GGACGGGGCT CCAAGCCCAA GGCGGGGCTC ACGGGCTTCT CGGTCTCCAA CCTGCGCATC
CCGGGTTTCG AGCAGCCCTG GGAGACGGAC CACGGCAAGC CCGGGCGCAT CGAGAGCGCC
CTGCGCATCA TGCTGGACGG ACCCATCGGC GCGGCGGCCT TCAACAACGA GTTCGGCCGT
CCAGCCCTGG CCGGCTATTT CCGCACCTTC GAGGAGCGGG TGCCGGGACC CGGTGGTGAA
CAGCTGCGGG GCTATCACAA GCCCATCATG ATCGCCGGCG GCCTGGGCAG CATGCGCCCT
GAACACGTGG AGAAGCTTGG GCTGCCCGAG GGCACGCCGG TGGTGGTGCT GGGCGGTCCG
GCCATGCTCA TCGGCCTGGG CGGTGGCGCG GCCTCGTCGG TGGCCAGCGG CGAGAGCGCC
GAGGACCTGG ACTTCGCCTC GGTGCAGAGG GGCAACCCGG AGATGGAACG CCGCTGCCAG
GAGGTGATCG ATCGCTGCAC CGCCATGGGC GAGGCCAACC CCATCCTGTC CATTCACGAC
GTGGGTGCGG GCGGCCTGTC CAACGCCGTG CCTGAGATCC TGAACGACGC CGGCCGCGGC
GGTGCCATCG AACTGCGTAC CGTCCCCTCG GACGAACCGG GCATGTCGCC CATGGAGATC
TGGTGCAACG AGGCCCAGGA ACGCTACGTG CTGGCCATCG ATCCGGATCG CCTGGAGGTG
TTCTCCGCCC TGTGCGAGCG GGAGCGGGCA CCGTTTGCCG TGATCGGCAC CGCCAGCGCG
GAGCAGCGCC TGCTGGTGGG CGACGGGCTG TTTCACAACG AGCCCGTGGA CCTGCCCATG
GAGGTGCTCC TGGGCAAGCC GCCCAAGATG CTGCGCGAGG TGCATCACCA GACCTTCCAC
AAGCCCGAGT TCGACACCTC GAACGTGGAT CTCGCCGACG CGGTACAGCG TGTGCTGCGT
CTGCCCTCGG TGGCCTCCAA GTCCTTCCTC ATCACCATCG GTGACCGGAC CATCACCGGC
CTGGTGACCC GGGACCAGAT GGTGGGTCCC TGGCAGGTGC CGGTGGCGGA CGTGGCGGTC
ACCGCCACGG ACCTGTACGG CCACACCGGC GAGGCCATGG CCATGGGCGA ACGCGCCCCC
ATCGCCCTGG TGCACCCCGC CGCTTCCGGG CGCATGGCCA TCGGCGAGAC CGTGACCAAC
CTGATGGCGG CCGACATCGG CACCATCGGC AACATCCGCC TGTCCGCCAA CTGGATGGCC
GCCGCAGGCT TCCCCGGCGA GGATGCGGCC CTGTTCGACA CGGTGAAAGC GGTGGGCGAG
GAACTGTGTC CGCGCCTCGG CCTCGCCATC CCCGTGGGCA AGGACTCGCT GTCCATGAAG
ACCGTGTGGA AGGACGCGGG CGGCGAGCAG GTGATGACCG CGCCGGTGTC ACTGATCGTC
ACCGGCTTCG CCCCGGTGGA GGACATCCGT CGCACCCGCA CGCCCCAGTT GCGCACCGAT
CTGGGGGATA CCGACCTGAT CCTCATCGAC CTGGGCAAGG GCCACAACCG CCTGGCGGGT
TCGGCGCTCG CCCAGGTGTA CAAACAGGTG GGTCACCACG CCCCGGACCT GGACGACCCG
GACATGCTCA AGCGCTGCTT CGCGGCGGTG CAGGAACTCA ATCGTGAGGG CAGGGTGCTG
GCCCTGCACG ACCGCTCCGA CGGCGGCCTC ATGGCCACGG TCTGCGAAAT GGCCTTCGCC
GGACACACCG GCGTGACCGT GCACCTGGAC GACCTGGGCG CCGACCCGGT GGCGGCCCTG
TTCAGCGAGG AGCTGGGCAT TCTCCTGCAG GTGCGCCACG AAGACACCGA GGAGGTGCTC
TCGGCCCTGC GGGAGGCGGA GCTGGGTCAT CACAGCCACG TGATCGGCAA CCTCAACGGC
GAGGATCGCA TCGAGTTCTG CCGCGGACGC CAGGTGCTGT ACGGCGCCGC GCGTGCCGAG
CTGCAGGCGG TCTGGTCCGA GACCAGCTAC CGGATGCAGG CGCTGCGTGA CAACCCGGAC
TGCGCCCGGG AGGAGTTCGA GCGCATCAGC GACGCCACCG ACCCGGGCCT GTCCCCGGTG
CTGGGCTTCG ATCCGGAGGA GGACGTGGCC GCGCCCTTCA TCAACACGGG CAGCCGCCCC
CGGGTGGCCA TCCTGCGCGA GCAAGGGGTG AACGGCCAGA TCGAGATGGC CGCCGCCTTC
GACCGGGCCG GTTTCGCCAG CGTCGACGTG CACATGACCG ACATCCTGTC CGGCCGCCTG
GACCTGTCCG GCTTCCGGGG CCTGGCCGCC TGCGGCGGCT TCTCCTACGG CGACGTGCTG
GGTGCGGGCG GCGGCTGGGC GCGCTCCATC CTGTTCAACC CCCGTGCCCG GGAGGTGTTC
CAGGCCTTCT TCGAGCGGGA TGACAGCTTC AGCCTGGGTG TCTGCAACGG CTGCCAGATG
CTCTCCCAGC TCAAGGACCT GATCCCCGGC GCCGCCCACT GGCCGCGCTT CCTGCGCAAC
CGCTCCGAAC AGTTCGAGGC GCGCCTCTCC CTGGTGGAGG TGAGCGAGAG CCCGTCCATT
CTGCTGGAGG GCATGGCGGG TTCAAGGTTG CCGGTGGCCG TGGCCCACGG CGAGGGCAGG
GTGGTGTTCG AGAGCGGAGA TCCTGCGGAT GCGCCGGGCG TTGCGCTGCG TTACGTGGAC
AACCGCGGAC AAGTCACCGA GCACTACCCC GAGAACCCCA ACGGTTCCCC CCAGGGCATC
ACCGGCCTGA CCACCCGGGA CGGGCGTGTG ACCATCATGA TGCCGCATCC AGAACGGGTG
TTCCGCACCG TGCAGCATTC CTGGCATCCG CCCCAGTGGG GCGAGACCGG GCCGTGGCTG
CGGCTGTTCA GGAATGCCCG GAAATGGGTG TCCTGA
|
|---|
| Protein sequence | MLFLPGAPAL SDFRLERLLG QLRETEPTIQ GLDARFVYFV DLERALTTAE QAVLEALLET
AGTAPAETAD FLVVPRLGTV SPWSSKATDI AHHCGLDGAV RRIERGISYR LKSGKALDIP
GRRRLAGLLH DRMTETVLLD PADAERLFVH HEPAPVTVIE LGDDARGALE RANAEMGLAL
SGEEIDYLAE AYGALGRAPT DVELMMFAQA NSEHCRHKIF NADWVIDGEA KEKSLFAMIR
NTYHHAPQGI LSAYRDNAAA MEGARGRRFM PDPESGEYRA EEMDLPIIMK VETHNHPTAI
SPFPGAATGA GGEIRDEGAT GRGSKPKAGL TGFSVSNLRI PGFEQPWETD HGKPGRIESA
LRIMLDGPIG AAAFNNEFGR PALAGYFRTF EERVPGPGGE QLRGYHKPIM IAGGLGSMRP
EHVEKLGLPE GTPVVVLGGP AMLIGLGGGA ASSVASGESA EDLDFASVQR GNPEMERRCQ
EVIDRCTAMG EANPILSIHD VGAGGLSNAV PEILNDAGRG GAIELRTVPS DEPGMSPMEI
WCNEAQERYV LAIDPDRLEV FSALCERERA PFAVIGTASA EQRLLVGDGL FHNEPVDLPM
EVLLGKPPKM LREVHHQTFH KPEFDTSNVD LADAVQRVLR LPSVASKSFL ITIGDRTITG
LVTRDQMVGP WQVPVADVAV TATDLYGHTG EAMAMGERAP IALVHPAASG RMAIGETVTN
LMAADIGTIG NIRLSANWMA AAGFPGEDAA LFDTVKAVGE ELCPRLGLAI PVGKDSLSMK
TVWKDAGGEQ VMTAPVSLIV TGFAPVEDIR RTRTPQLRTD LGDTDLILID LGKGHNRLAG
SALAQVYKQV GHHAPDLDDP DMLKRCFAAV QELNREGRVL ALHDRSDGGL MATVCEMAFA
GHTGVTVHLD DLGADPVAAL FSEELGILLQ VRHEDTEEVL SALREAELGH HSHVIGNLNG
EDRIEFCRGR QVLYGAARAE LQAVWSETSY RMQALRDNPD CAREEFERIS DATDPGLSPV
LGFDPEEDVA APFINTGSRP RVAILREQGV NGQIEMAAAF DRAGFASVDV HMTDILSGRL
DLSGFRGLAA CGGFSYGDVL GAGGGWARSI LFNPRAREVF QAFFERDDSF SLGVCNGCQM
LSQLKDLIPG AAHWPRFLRN RSEQFEARLS LVEVSESPSI LLEGMAGSRL PVAVAHGEGR
VVFESGDPAD APGVALRYVD NRGQVTEHYP ENPNGSPQGI TGLTTRDGRV TIMMPHPERV
FRTVQHSWHP PQWGETGPWL RLFRNARKWV S
|
|---|
| |