| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1494 |
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| Symbol | |
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| ID | 7317980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1598978 |
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| End bp | 1600105 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616385 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_002513565 |
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| Protein GI | 220934666 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein
[TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000338364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTCAG TGCAAGCGTA TCTTGCCTGG GATGAGTCCC CCAAGGGCGT CGTGCTGCGC
CTGGCGGGAC GGCTGGACGT GCACACGGTA TCCACTGTCT GGGGCGAGGC CCTGGCAGGC
CTCAAGGTCA GGTCAGGGCG TCCGGTGCGC GTGGACACCA GCGGCGTGGA CTACTGCGAC
GGTGCCGGCG TGGCCCTGGT CGTGGATCTG CTGCGCCAGC CCCGGGACCC GGGCGCCGAG
GTGGGCCTCG GCGAGACGCC GGAGGAGGTG CGACGCATGC TCGTGCCCTT CGATGTGCGT
GACTTCAGCG GCGAGGCGGT GCCGCCCCAA CGGGGGCCGG GTCTCAAGCA GCACCTGGCC
AACGGCATGC ATGACCTGGG TCGCTATCTC TATCTGCAGG TGGCCTTCGT CGGCGAGGCC
ACGGCGGCGA TGTTTCACGC CGCCCGCCAT CCCCGCCAGG TGCGCTGGCG CGATGCCCTG
AATCTGGCCC AGGAGGCGGG CGCAAACGCC CTGCCCATCG TTATGCTCAT CGCCTTCCTG
ATGGGTGTGA TCCTGGCCTT CCAGTCCGCC GTGGCCATGC GCCAGTTCGG TGCCGAGATC
TTCGTGGCCA ATCTGGTGGC CCTGTCCCTG CTGCGGGAAC TGGCGCCGCT GATGACCGCC
ATCCTCCTGG CGGGACGTTC CGGCGCCGCC TTCGCCGCCG AGATCGGCAC CATGAAGGTG
AACGAGGAGA TCAATGCCCT GACCACCATG GGCCTGGATC CGGTGCGTTT CCTGGTGGTA
ACCCGGGTGC TGGCGGCGGT GGCGGTGATG CCCCTGCTGA CCCTGGTGGC CAACCTGGTG
GGGCTGGTGG GCGGTGCGGT GGTGATGAAG GGTTTCGACA TCCCCTTCGT CACTTACTTC
AACCAGGTGA CCAGCGCCGT GACCCTCTCG GACCTGCTGG GTGGCCTGTT CAAGGCCACG
GTGTTCGGCC TGCTGGTCGC CGGGGTGGGT TGCCTGCGCG GCCTGGAGAC GCGCAGCGGT
GCGGCGGCGG TGGGCATCTC CACGACCCGC GCGGTGGTCA GTGCTATCAT TCTGATCGTC
GTGGCGGACG GCGTGTTCGC CGTGGTCTTC TACCATCTGG ACATCTGA
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| Protein sequence | MKSVQAYLAW DESPKGVVLR LAGRLDVHTV STVWGEALAG LKVRSGRPVR VDTSGVDYCD
GAGVALVVDL LRQPRDPGAE VGLGETPEEV RRMLVPFDVR DFSGEAVPPQ RGPGLKQHLA
NGMHDLGRYL YLQVAFVGEA TAAMFHAARH PRQVRWRDAL NLAQEAGANA LPIVMLIAFL
MGVILAFQSA VAMRQFGAEI FVANLVALSL LRELAPLMTA ILLAGRSGAA FAAEIGTMKV
NEEINALTTM GLDPVRFLVV TRVLAAVAVM PLLTLVANLV GLVGGAVVMK GFDIPFVTYF
NQVTSAVTLS DLLGGLFKAT VFGLLVAGVG CLRGLETRSG AAAVGISTTR AVVSAIILIV
VADGVFAVVF YHLDI
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