| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1478 |
|---|
| Symbol | |
|---|
| ID | 7317964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 1582322 |
|---|
| End bp | 1584685 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643616369 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002513549 |
|---|
| Protein GI | 220934650 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCC TGTACCGCAA GCTCGCCCGC GAGCTCTGGC ACCTGCGCGG CCAGGTGCTC
GCCATCGCCG TCGTGATCGC CGGCGGCATG GCCACCCTGG TCATGTCGCT CACCTCCCTG
GATGCCCTGT CCCTCACCCG GGACGCCTAC TACCGGGACT ACCGATTCGC GGACATCTTC
GTCACGATTA AACGAGCCCC CGAATCCCTG CGCGAGGCGG TGGAGAACAT CCCCGGGGTT
CAGCAGGTGG AGACGCGGGT GGTCTCCGGA GCGAACCTGG ACATCCCCGG TTTCGTGGAT
CCCGCCACCG GCATCCTCAT CTCCCTGCCC GACGGCCGCA ACTCGGAACT CAATCGCCTG
TTCCTGCGCA CGGGCCGGCT GCCGGAGGCA GGACGCTCGG GCGAGGCGGT GGTCAACGAG
GCCTTTGCCC AGGCCCATGG CTTCGTGCCC GGTGACCGCA TCGGCGCGAT CATCAACGGC
CGCCTGCAGC ACATCGAGAT CGTGGGCATC GTGCTCTCGC CGGAATACAT CTACCACGTG
GCCCCCGGCG AACTGTTCCC GGATTTCGCC CGCTTAGGGA TCCTATGGAT GAACCGCAGC
CAGCTGGCCG CTGCCTTCGA CATGGACGGT GCCTTCAACG ACCTGGTGCT CACCCTGACC
CGGGACGCAC GCAGCGGCGA TGTGATCGAC CGACTGGATG CCCTGCTCGC CCCCTACGGC
GGCCAGGGTG CTGTGGGCCG TGAGGATCAG CTTTCCCACC GCTATCTGGA CGTGGAGCTG
GGGCAGCTGC GCACCATGGC AACGGTGTTC CCCGCCATCT TCCTGGCGGT GGCGGCCTTC
CTGCTCAACG TGGTGCTGAC TCGGCTGATC AACACCCAGC GTGACCAGCT GGGCATCCTC
AAGGCCTTCG GCTACAGCAA TCTCAACGTG GGCCTGCACT ACGCCCAGAT GGTGCTGGTG
ATCCTGGTCA TCGGCCTGAT GCTGGGCACG GCGGTGGGGC TGTGGCTCGG TTCGATGATG
GCGGCCCTGT ACCAGGACTT CTTCCGCTTC CCCTACCTGG AACTGCAGCT GCAGGCCCGC
AGCGTGGCCC TGGGCACCCT GGTGACCCTG GCCGCGGGTC TGCTGGGCAC CGCCATGGCC
CTGGTGCGGG CGGTGCGCAT CCCGCCGGCC GAGGCCATGC GCCCGGAACC CGCGCCGGTG
TTTCGCGCGA CGCTCGTGGA ACGCCTGGGC CTGCAGCGCC TGTTCTCCCA GCCCAGCCGC
ATGATCCTGC GCAACATTGA GCGCCGCCCG TTCAAGGCCC TGCTGTCCGT CACCGGCATC
GCCTTCGCCT GCGGCATCCT GGTACTGGGC GGCTACCAGG AAGGCGCCAT CACCTATCTG
ATCAAGGTCC AGTACGGGCA GGCCCAGCGG GACGACCTGA CCGTGGTGTT CACGGAACCC
ACCTCCCGGC GCGCCATGTA CGAACTCGCC GCCCTGTCCG GCGTGGATCA CGTGGAACCG
TTTCGAAGCG CCGCCGTGCG CTTGAGCAAG GGACAGGCCG TCTACCGCAC CGCCATCCGC
GGGGTAGAGC CGGACAGCCG CCTGCACCGC ATCCTGGATG ACCGGCTTCA GGTGGTCACT
CTTCCCCCGG AAGGCCTGGT GCTGAACGAC TTCCTGGCCG ATCACCTGGA TGCCCGGCCA
GGGGACACGG TGTGGGTCGA ATTCCTGGAG GGGCGTCGTG AACAGCTGCC GGTACCGGTC
ACCGACGTGA TCCGGGAATT CACCGGCGCC TCCGCCTACA TGGACCTGGA TGCCCTGAAC
CGGATCATGC GCGAAGGCAC GGCCATCTCC GGAGTCTGGC TCGCGGTGGA TCATGAGCAC
CGCGACGAGA TCGTCGACGT CCTCAAGGAT GTTCCCCGGG TGGCCGGTGT CACCGACCGG
CTGAAGGCCA TCCAGAACTT CATGGACTCC ATGGCCGAGA TCGTGCTGAC CTTCGCGTTC
TTCAGCACCC TGCTGGCCGG CAGCATCGCC TTCGGCGTGG TCTACAACAG CGCGCGCATC
GCGCTCACGG AACGTGCCCG CGAGCTGGCC AGCCTGCGGG TGCTGGGACT CACCCGGGGC
GAGATCAGCT ATATCCTGCT GGGCGAACTG TTTCTCATCG CCCTGGCGGC CATCCTGCCG
GGCTTCCTGA TCGGCAAGGC CCTGGTCTAC CTGCTGGTGG GCACCATGGA TTCCGATCTC
TACCGGGTAC CCCTGGTCAT CACCCCCGAT GCCTACGCCT TCGCCGCCGC GGTGATCCTG
GTCGCCACTG TGCTGTCGGC ACTGGTGGTG CTTCGCCGCC TGAACCGGCT GGATCTGGTG
GAAGTGCTCA AGAGCAGGGA GTAG
|
|---|
| Protein sequence | MNALYRKLAR ELWHLRGQVL AIAVVIAGGM ATLVMSLTSL DALSLTRDAY YRDYRFADIF
VTIKRAPESL REAVENIPGV QQVETRVVSG ANLDIPGFVD PATGILISLP DGRNSELNRL
FLRTGRLPEA GRSGEAVVNE AFAQAHGFVP GDRIGAIING RLQHIEIVGI VLSPEYIYHV
APGELFPDFA RLGILWMNRS QLAAAFDMDG AFNDLVLTLT RDARSGDVID RLDALLAPYG
GQGAVGREDQ LSHRYLDVEL GQLRTMATVF PAIFLAVAAF LLNVVLTRLI NTQRDQLGIL
KAFGYSNLNV GLHYAQMVLV ILVIGLMLGT AVGLWLGSMM AALYQDFFRF PYLELQLQAR
SVALGTLVTL AAGLLGTAMA LVRAVRIPPA EAMRPEPAPV FRATLVERLG LQRLFSQPSR
MILRNIERRP FKALLSVTGI AFACGILVLG GYQEGAITYL IKVQYGQAQR DDLTVVFTEP
TSRRAMYELA ALSGVDHVEP FRSAAVRLSK GQAVYRTAIR GVEPDSRLHR ILDDRLQVVT
LPPEGLVLND FLADHLDARP GDTVWVEFLE GRREQLPVPV TDVIREFTGA SAYMDLDALN
RIMREGTAIS GVWLAVDHEH RDEIVDVLKD VPRVAGVTDR LKAIQNFMDS MAEIVLTFAF
FSTLLAGSIA FGVVYNSARI ALTERARELA SLRVLGLTRG EISYILLGEL FLIALAAILP
GFLIGKALVY LLVGTMDSDL YRVPLVITPD AYAFAAAVIL VATVLSALVV LRRLNRLDLV
EVLKSRE
|
|---|
| |