Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1478 |
Symbol | |
ID | 7317964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1582322 |
End bp | 1584685 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616369 |
Product | hypothetical protein |
Protein accession | YP_002513549 |
Protein GI | 220934650 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCCC TGTACCGCAA GCTCGCCCGC GAGCTCTGGC ACCTGCGCGG CCAGGTGCTC GCCATCGCCG TCGTGATCGC CGGCGGCATG GCCACCCTGG TCATGTCGCT CACCTCCCTG GATGCCCTGT CCCTCACCCG GGACGCCTAC TACCGGGACT ACCGATTCGC GGACATCTTC GTCACGATTA AACGAGCCCC CGAATCCCTG CGCGAGGCGG TGGAGAACAT CCCCGGGGTT CAGCAGGTGG AGACGCGGGT GGTCTCCGGA GCGAACCTGG ACATCCCCGG TTTCGTGGAT CCCGCCACCG GCATCCTCAT CTCCCTGCCC GACGGCCGCA ACTCGGAACT CAATCGCCTG TTCCTGCGCA CGGGCCGGCT GCCGGAGGCA GGACGCTCGG GCGAGGCGGT GGTCAACGAG GCCTTTGCCC AGGCCCATGG CTTCGTGCCC GGTGACCGCA TCGGCGCGAT CATCAACGGC CGCCTGCAGC ACATCGAGAT CGTGGGCATC GTGCTCTCGC CGGAATACAT CTACCACGTG GCCCCCGGCG AACTGTTCCC GGATTTCGCC CGCTTAGGGA TCCTATGGAT GAACCGCAGC CAGCTGGCCG CTGCCTTCGA CATGGACGGT GCCTTCAACG ACCTGGTGCT CACCCTGACC CGGGACGCAC GCAGCGGCGA TGTGATCGAC CGACTGGATG CCCTGCTCGC CCCCTACGGC GGCCAGGGTG CTGTGGGCCG TGAGGATCAG CTTTCCCACC GCTATCTGGA CGTGGAGCTG GGGCAGCTGC GCACCATGGC AACGGTGTTC CCCGCCATCT TCCTGGCGGT GGCGGCCTTC CTGCTCAACG TGGTGCTGAC TCGGCTGATC AACACCCAGC GTGACCAGCT GGGCATCCTC AAGGCCTTCG GCTACAGCAA TCTCAACGTG GGCCTGCACT ACGCCCAGAT GGTGCTGGTG ATCCTGGTCA TCGGCCTGAT GCTGGGCACG GCGGTGGGGC TGTGGCTCGG TTCGATGATG GCGGCCCTGT ACCAGGACTT CTTCCGCTTC CCCTACCTGG AACTGCAGCT GCAGGCCCGC AGCGTGGCCC TGGGCACCCT GGTGACCCTG GCCGCGGGTC TGCTGGGCAC CGCCATGGCC CTGGTGCGGG CGGTGCGCAT CCCGCCGGCC GAGGCCATGC GCCCGGAACC CGCGCCGGTG TTTCGCGCGA CGCTCGTGGA ACGCCTGGGC CTGCAGCGCC TGTTCTCCCA GCCCAGCCGC ATGATCCTGC GCAACATTGA GCGCCGCCCG TTCAAGGCCC TGCTGTCCGT CACCGGCATC GCCTTCGCCT GCGGCATCCT GGTACTGGGC GGCTACCAGG AAGGCGCCAT CACCTATCTG ATCAAGGTCC AGTACGGGCA GGCCCAGCGG GACGACCTGA CCGTGGTGTT CACGGAACCC ACCTCCCGGC GCGCCATGTA CGAACTCGCC GCCCTGTCCG GCGTGGATCA CGTGGAACCG TTTCGAAGCG CCGCCGTGCG CTTGAGCAAG GGACAGGCCG TCTACCGCAC CGCCATCCGC GGGGTAGAGC CGGACAGCCG CCTGCACCGC ATCCTGGATG ACCGGCTTCA GGTGGTCACT CTTCCCCCGG AAGGCCTGGT GCTGAACGAC TTCCTGGCCG ATCACCTGGA TGCCCGGCCA GGGGACACGG TGTGGGTCGA ATTCCTGGAG GGGCGTCGTG AACAGCTGCC GGTACCGGTC ACCGACGTGA TCCGGGAATT CACCGGCGCC TCCGCCTACA TGGACCTGGA TGCCCTGAAC CGGATCATGC GCGAAGGCAC GGCCATCTCC GGAGTCTGGC TCGCGGTGGA TCATGAGCAC CGCGACGAGA TCGTCGACGT CCTCAAGGAT GTTCCCCGGG TGGCCGGTGT CACCGACCGG CTGAAGGCCA TCCAGAACTT CATGGACTCC ATGGCCGAGA TCGTGCTGAC CTTCGCGTTC TTCAGCACCC TGCTGGCCGG CAGCATCGCC TTCGGCGTGG TCTACAACAG CGCGCGCATC GCGCTCACGG AACGTGCCCG CGAGCTGGCC AGCCTGCGGG TGCTGGGACT CACCCGGGGC GAGATCAGCT ATATCCTGCT GGGCGAACTG TTTCTCATCG CCCTGGCGGC CATCCTGCCG GGCTTCCTGA TCGGCAAGGC CCTGGTCTAC CTGCTGGTGG GCACCATGGA TTCCGATCTC TACCGGGTAC CCCTGGTCAT CACCCCCGAT GCCTACGCCT TCGCCGCCGC GGTGATCCTG GTCGCCACTG TGCTGTCGGC ACTGGTGGTG CTTCGCCGCC TGAACCGGCT GGATCTGGTG GAAGTGCTCA AGAGCAGGGA GTAG
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Protein sequence | MNALYRKLAR ELWHLRGQVL AIAVVIAGGM ATLVMSLTSL DALSLTRDAY YRDYRFADIF VTIKRAPESL REAVENIPGV QQVETRVVSG ANLDIPGFVD PATGILISLP DGRNSELNRL FLRTGRLPEA GRSGEAVVNE AFAQAHGFVP GDRIGAIING RLQHIEIVGI VLSPEYIYHV APGELFPDFA RLGILWMNRS QLAAAFDMDG AFNDLVLTLT RDARSGDVID RLDALLAPYG GQGAVGREDQ LSHRYLDVEL GQLRTMATVF PAIFLAVAAF LLNVVLTRLI NTQRDQLGIL KAFGYSNLNV GLHYAQMVLV ILVIGLMLGT AVGLWLGSMM AALYQDFFRF PYLELQLQAR SVALGTLVTL AAGLLGTAMA LVRAVRIPPA EAMRPEPAPV FRATLVERLG LQRLFSQPSR MILRNIERRP FKALLSVTGI AFACGILVLG GYQEGAITYL IKVQYGQAQR DDLTVVFTEP TSRRAMYELA ALSGVDHVEP FRSAAVRLSK GQAVYRTAIR GVEPDSRLHR ILDDRLQVVT LPPEGLVLND FLADHLDARP GDTVWVEFLE GRREQLPVPV TDVIREFTGA SAYMDLDALN RIMREGTAIS GVWLAVDHEH RDEIVDVLKD VPRVAGVTDR LKAIQNFMDS MAEIVLTFAF FSTLLAGSIA FGVVYNSARI ALTERARELA SLRVLGLTRG EISYILLGEL FLIALAAILP GFLIGKALVY LLVGTMDSDL YRVPLVITPD AYAFAAAVIL VATVLSALVV LRRLNRLDLV EVLKSRE
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