Gene Tgr7_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1393 
Symbol 
ID7317720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1490744 
End bp1491346 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID643616283 
ProductGTP cyclohydrolase I 
Protein accessionYP_002513465 
Protein GI220934566 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.367158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATC ACGACTGCTG CGAGCAGGAA GACGATTTTC CCGGTGCCGA TGCCGAACAG 
CGCATGGCCG AGGACTACAC CCGCATCATC CGCGGCCTCG GGGAGGACCC CGATCGCAAC 
GGCCTGATCG GCACCCCGCT GCGCGCGGCC CGGGCCATGT CCTACCTGAC CCGCGGTTAT 
CACCAGAGCC TGGACGAGCT GGTCAACGGC GCCCTGTTCG AGACCGACAA CGACGAGATG 
GTGCTGGTGC GCGACATCGA GTTCTACTCC CTGTGCGAGC ATCACCTGCT GCCCTTCCTG 
GGCCGCTGCC ACGTGGCCTA CCTGCCCAAG GGCAGGGTGA TCGGTCTGTC CAAGATCGCC 
CGCATCGTGG ACATGTTCGC CCGCCGCCTG CAGATCCAGG AGACCCTCAC GCGCCAGATC 
GCCGAGGCCA TCGAGTCGGT GACCGATGCC CGGGGCGTGG CGGTGGTCAT GGAGGCCAAG 
CACATGTGCA TGATGATGCG CGGCGTGGAG AAGCAGAACT CCACCATGAC CACCTCCATG 
ATGACCGGCA CCTTCCGTAA CGATGCCCGC ACCCGTGCGG AATTCATGGG CTTGATCAGA 
TAG
 
Protein sequence
MSHHDCCEQE DDFPGADAEQ RMAEDYTRII RGLGEDPDRN GLIGTPLRAA RAMSYLTRGY 
HQSLDELVNG ALFETDNDEM VLVRDIEFYS LCEHHLLPFL GRCHVAYLPK GRVIGLSKIA 
RIVDMFARRL QIQETLTRQI AEAIESVTDA RGVAVVMEAK HMCMMMRGVE KQNSTMTTSM 
MTGTFRNDAR TRAEFMGLIR