| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1371 |
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| Symbol | |
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| ID | 7317863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1471563 |
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| End bp | 1473326 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643616261 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_002513443 |
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| Protein GI | 220934544 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.680862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTC ATCCGGAAGA GTATACCGGC GTCGAGGTCT ACCGCCGCCT GCTCGGGTAT
TCGTTTTCCC ACTGGCCGTG GCTGGTCGCC TCCGTGCTGA CCATGGTGAT CGTGGCGGCG
ACCGAGGCGG GTTTTGCCGC GCTCATGCGC CCGCTGATGG ATTCGGGTTT TGTGGAGCGG
GACCAGAGCG CGATCCGATG GGTGCCGCTG GCCATCATCG CCATCTTCGC CATCCGCGGC
ATTGCCGAAT TCGCCGCCTC CTACACCATC AAGTACGTCG GCCGCATGGT GGTCAAGAAG
CTTCGCAGTC AGCTGTTCGA CCACCTGCTG CGCCTGCCGG TGAGCCACTA CGACGGTGCC
GCCTCGGGCC AGCTGATCTC GCGGCTCTCC TACAACGTGG AGCAGGTGGC CTCGGCAGCT
ACCGAGAGTA TCTCCATCCT GGTGCGCGAT ACCCTCACGG TGCTCGGACT GCTGGCCTGG
ATGCTCTACC TCAACTGGAT GCTCACCCTG GCCGTGCTCA TCATCGCGCC TGTGGTGGCG
GTGCTGGTGA GCCAGGTCAC CAGTCGCTTT CGCAAGATCA GCCATCGCAT CCAGCGCACC
ATGGGCGATG TCACCCAGGT GACCCAGGAG GTGATTGAAG GCAACCGGGT GGTGAAGATC
TTCGGCGGCG AGGATTACGA GCGTAACCGC TTCGAGAAGA TCAACGAGCG CAACCGCAGC
CTGCACATGA AGATGGTGTT CACCCACGCG ATCCATCTGC CGCTGATCCA GTTCATCGGT
GCCCTGGCAG TGGCCTTCAT CGTCTGGCTC GCCACCTTCG AGGCGGTGAT CGAGAGCGTC
ACGGTGGGCA CCTTCGTCTC CCTGATCACG GCGCTGCTGT TGCTGCTCAA CCCCATCCGC
CGGCTCACCA ACGTCAACCA GATGCTGCAA AAGGGCATTG CCGCCGGGCA GAACATCTTT
GCCCTGCTGG ATTCGGACAT CGAGCGCGAC CAGGGCGAAC TGCGCCTGGA ACGCGCCCGG
GGCGACATCC AGTACCGGAA CCTGCGTTTC GCCTACGGGC CGGACAAGGG CGATGTGCTG
CACGACATCA ACCTGCACAT CCATCCCGGC GAGACCGTGG CCCTGGTGGG CCGCTCCGGC
AGCGGCAAGA CCACCCTGGT CAACCTGCTG CCCCGGTTCT ACGAGGCCTA TGAGGGCGAG
GTGCTGCTGG ACGGGGTGAA CGTCAACCAG TACCGGCTCG CCGATCTGCG CAACCAGGTG
GCCTACGTGG GCCAGCACGT CACCCTGTTC AACGACACCA TCGGCCGCAA CATCGCCTAC
GGCAGCCTGG GTGATGTCAG CGAGGCGGAC ATCGTGCGCG CCGCCGAGGC GGCCCATGCC
ATGGAGTTCA TCCGCCACCT GCCCCAGGGG CTCGATACCC CGGTAGGTGA CAACGGCGTG
ATGCTCTCCG GTGGGCAGCG CCAGCGTCTG GCCATCGCCC GGGCACTCCT CAAGGACGCC
CCCATCCTGA TCCTGGACGA GGCCACCTCG GCCCTGGATA CGGAGGCCGA GCGCCATATC
CAGGCGGCCC TGGAAAATCT CATCCGCAAC CGCACCACCC TGGTGATCGC CCATCGCCTG
TCCACCATCG AGCGGGCGGA CCGCATCGTG GTGATGCAGG AGGGGCGCAT TGCCGAGTCC
GGCCGCCACG ACGAGCTGCT TGAGCGTGAC GGCATCTACG CGCGCCTCTA CCGGCTGCAG
TTCGAGGGCG ACCGTGACGT CTGA
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| Protein sequence | MARHPEEYTG VEVYRRLLGY SFSHWPWLVA SVLTMVIVAA TEAGFAALMR PLMDSGFVER
DQSAIRWVPL AIIAIFAIRG IAEFAASYTI KYVGRMVVKK LRSQLFDHLL RLPVSHYDGA
ASGQLISRLS YNVEQVASAA TESISILVRD TLTVLGLLAW MLYLNWMLTL AVLIIAPVVA
VLVSQVTSRF RKISHRIQRT MGDVTQVTQE VIEGNRVVKI FGGEDYERNR FEKINERNRS
LHMKMVFTHA IHLPLIQFIG ALAVAFIVWL ATFEAVIESV TVGTFVSLIT ALLLLLNPIR
RLTNVNQMLQ KGIAAGQNIF ALLDSDIERD QGELRLERAR GDIQYRNLRF AYGPDKGDVL
HDINLHIHPG ETVALVGRSG SGKTTLVNLL PRFYEAYEGE VLLDGVNVNQ YRLADLRNQV
AYVGQHVTLF NDTIGRNIAY GSLGDVSEAD IVRAAEAAHA MEFIRHLPQG LDTPVGDNGV
MLSGGQRQRL AIARALLKDA PILILDEATS ALDTEAERHI QAALENLIRN RTTLVIAHRL
STIERADRIV VMQEGRIAES GRHDELLERD GIYARLYRLQ FEGDRDV
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