| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1341 |
|---|
| Symbol | |
|---|
| ID | 7317833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1440010 |
|---|
| End bp | 1442085 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643616231 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_002513413 |
|---|
| Protein GI | 220934514 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGG ATAGCGATGA CGAGATTCTG CAGGACTTTC TGGTGGAGGC CGGGGAACTG
CTGGAAGGGC TCAGTGAGCA GCTGGTGGAA CTGGAGCGCA ACCCCACCGA CCGTGACCTG
CTCAATGCGG TGTTTCGCAG CTTCCACACC ATCAAGGGCG GCGCGGGATT CCTCAATCTC
ACCCACCTGG TGGCGGTGTG CCACCGGGCC GAAGACGTGT TCAACGTGCT GCGCCAGGGC
CAGCGCCAGG TGGATGGCGC GCTCATGGAC GCCGTGCTGC AGGTGCTGGA CGTGGTCAAC
CGCATGTTCG GCGAGATCCG CGGCGGCGTC GAGCCGGGGC CCGCGGATCC CGAGCTGCTG
ACGCGGCTGG AATCCATGAC CGGGCCCGCG GACGCCGCGC CTGCGCCGTC TCCCGTCGCC
GAGGCGCCTC CGCCCGCCCC CGAGCCTGCC CCGCCTGTGT CTGCCAGCCC TGCCGTGCCG
GCCGGCGATG GCGACATCAC CGACGAGGAA TTCGAGGCCC TCCTGGATGC CATGCAGTCC
GGTGGCAGCG CGCCCGCGCT GGCCGCAGCA CCGGCCGCTT CGCACAAGAG CGACGAGATC
ACTGAGGACG AATTCGAGAG CCTGCTGGAC GAACTGCACG GCAAGGGCAA TGCGCCTGTC
GAGAGCAAGG CCTCACCCCC GGCCGCAGGC AGCTCCGCGG ACCCGGATCT GATCAGCGAG
GATGAATTCG AGCACCTGCT GGACGAACTG CACGGCAAGG GCAAGGCACC GGTCGTGGCG
TCTGCCAAGG CCGCGCCCGC CGCTGCTGCA CCACCCGCCG CGAAGCCGGC TGCTGCGCCT
GCCCCTGCCG CCGCCCCCGC CGCCGCCCCC GCCGCTGCGA CCCCTGCGAC CCAGGCACAG
CCCGCCGCAG AGACCTCGGT GCGCGTGGAC ACCAAGCGCC TGGACGACAT CATGAACCTG
GTGGGCGAAC TGGTGCTGGT GCGCAACCGT CTGGCCACCC TGCGTTCCAA GATGTCCGAC
GAGCAGGTGG CCAAGGCGGT CAGCAACCTG GACATCGTCA CCGCCGACCT GCAGGCGGCG
GTGATGAAGA CGCGCATGCA GCCCATCAAG AAGGTGTTCG GGCGCTTCCC CCGGGTGGTG
CGCGACCTGG CCCGCAGCCT CAACAAGGAG ATCGATCTGG AGTTGCGCGG CGAGGAGACC
GATCTGGACA AGAACCTGGT GGAGGCCCTG GCCGATCCGC TGGTGCACCT GGTGCGCAAC
GCCGTGGACC ACGGCATCGA GTCCCCCGAG GAGCGGGTCG CCGCCGGCAA GTCCCGCACC
GGACACGTGG TGCTGTCCGC CGAGCAGGAG GGCGACCACA TCCTGCTGAC CATCGCCGAT
GACGGCAAGG GCATGGATCC GGACGTGCTG CGCGCCAAGG CCGTGGAGAA GGGGCTCATG
GACGAGGATG CGGCCCAGCG CATGACCGAC CAGGATGCCT TCAACGTCAT CTTCATGGCG
GGCTTCTCCA CCAAGGAGGC CATCTCCGAC ATCTCCGGTC GCGGCGTCGG CATGGATGTG
GTGAAGACCC GTATCGCGCA ATTGAACGGC ACCATCGAGA TCGATTCCAA AAAGGGTCAG
GGCAGCACCC TGCGCATCAA GGTGCCGCTC ACCCTGGCCA TCCTGCCCAC CCTCATGGTG
GTGCTGGGCA ACCAGCGTTT CGCCCTGCCG CTGGCCAATG TGAGCGAGAT CTTCGACCTG
GATCTGTCCC GCACCAACCA CGTGGATGAC CAGGAGGTGA TCATGGTGCG CAACCAGGCC
CTGCCGCTGT ATTACCTGCG CCGCTGGCTG GCCCGCAGCG ATGCGCCCAA GGTGAACCGC
GAGACGCAGC ACGTGGTGGT GGTGTTCGTG GGCAACCGGC GCGTGGGTTT CGTGGTGGAC
AGCCTGATCG GCCAGGAAGA GGTGGTGATC AAACCCCTCG GCGCCTCGCT GCACGGACTG
CCGGGCTTCG CCGGTGCCAC CATCACCGGC GATGGCGGCA TCGCCCTGAT CCTGGACGTG
CCCAGCCTGC TCAAGGCCTA CGCGCGGCGT TTCTGA
|
|---|
| Protein sequence | MSLDSDDEIL QDFLVEAGEL LEGLSEQLVE LERNPTDRDL LNAVFRSFHT IKGGAGFLNL
THLVAVCHRA EDVFNVLRQG QRQVDGALMD AVLQVLDVVN RMFGEIRGGV EPGPADPELL
TRLESMTGPA DAAPAPSPVA EAPPPAPEPA PPVSASPAVP AGDGDITDEE FEALLDAMQS
GGSAPALAAA PAASHKSDEI TEDEFESLLD ELHGKGNAPV ESKASPPAAG SSADPDLISE
DEFEHLLDEL HGKGKAPVVA SAKAAPAAAA PPAAKPAAAP APAAAPAAAP AAATPATQAQ
PAAETSVRVD TKRLDDIMNL VGELVLVRNR LATLRSKMSD EQVAKAVSNL DIVTADLQAA
VMKTRMQPIK KVFGRFPRVV RDLARSLNKE IDLELRGEET DLDKNLVEAL ADPLVHLVRN
AVDHGIESPE ERVAAGKSRT GHVVLSAEQE GDHILLTIAD DGKGMDPDVL RAKAVEKGLM
DEDAAQRMTD QDAFNVIFMA GFSTKEAISD ISGRGVGMDV VKTRIAQLNG TIEIDSKKGQ
GSTLRIKVPL TLAILPTLMV VLGNQRFALP LANVSEIFDL DLSRTNHVDD QEVIMVRNQA
LPLYYLRRWL ARSDAPKVNR ETQHVVVVFV GNRRVGFVVD SLIGQEEVVI KPLGASLHGL
PGFAGATITG DGGIALILDV PSLLKAYARR F
|
|---|
| |