Gene Tgr7_1329 details

Gene Information

• Locus tag: Tgr7_1329
• ID: 7317821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1429676
• End bp: 1430140
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643616219
• Product: flagellar motor switch protein FliN
• Protein accession: YP_002513401
• Protein GI: 220934502
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.101515
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACG ACAAGAAACC GGAAACCGAT CAGGACGCCA TGGCCGACGA CTGGGCCGCC 
GCACTGGCGG AACAGGCCGA GACCGAGGCC AAGCCCGAGG ACAAGCCCGC CAAGGGCAAG 
GGCGCCAAGG CCGAGAGCGA TGCGGTGCAG AAGGCCAGTT TTGATTCCTT GGCCTCGGAG 
AGCCGCGCTC CGGCCACCCA GGAGGACGTG AACCTGGACG TGGTGCTGGA CATCCCGGTG 
ACCATCTCCA TGGAGATCGG TCGGACCCGG ATGCCCATCC GCAACCTGCT GCAGCTCAAC 
CAGGGTTCCG TGGTGGAGCT GGACCGCCTG GCCGGCGAAC CCCTGGACGT GTACGTCAAC 
GGCACGCTCA TCGCCCACGG CGAGGTGGTG GTGGTGAACG AGAAGTTCGG CATCCGCCTC 
ACCGACGTGA TCAGCCCCAC CGAACGGGTC AAGAAGCTCA AGTAA 

 

Protein sequence

MSDDKKPETD QDAMADDWAA ALAEQAETEA KPEDKPAKGK GAKAESDAVQ KASFDSLASE 
SRAPATQEDV NLDVVLDIPV TISMEIGRTR MPIRNLLQLN QGSVVELDRL AGEPLDVYVN 
GTLIAHGEVV VVNEKFGIRL TDVISPTERV KKLK