Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1307 |
Symbol | |
ID | 7317798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1403079 |
End bp | 1404776 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643616197 |
Product | polysaccharide export protein |
Protein accession | YP_002513380 |
Protein GI | 220934481 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGCT CACGCTGCTT CGCAGGATTT TTCTGCTTCC TCCTAATGGT TGCGCTGCCC GCTGCCGCCC TGGCGCAGTC CATTACGGGC ATGGGCGAAC TCCCCAGAGA GCAGCAGGCC GAACCGATTC GCGATGTGCT GGAGTCTCCG CCCTCGCTGG AACGGCGTAC GGGAACCTAC GGTCCAGTAG ACCGCCAGGG ACTGCACGCC GATGACATAC CTCCCTTTGG CGCTAATCTG TTCAGGGGTG GCTTCAGGGG CATTCGCAGT TCGGGGATTA ACCCGGCCTA TCGCATCATG CCCGGGGATC AGATCACCCT GCGCACCTGG GGGGCGGTTG CCATGGAGCG GGTGCTCCCC GTGGACGCCC AGGGCAACAT CTTCATTCCC CAGGTGGGTC CCGTGCAGGT TCAGGGTACC TCGGCGGCTG AACTGAACGG GCGCGTCGAA TCGGCCATCC GGCGGGTCTT CCGTGACAAC GTTTCCGTGT ACACGAACCT GCAGGGGGTG CAGCCCGTCG CGGTGTTCGT CACCGGCTTC GTCAACAGCC CGGGGCTGTA TGCGGGCGTC CCCAGTGACT CGCTGTTGTA TTTTCTCGAC CAGGCTTCAG GCATTGATGT CGCCTCCGGC AGCTTTCGGG ATATCCGCAT CCTGCGGGGC GGACGAACCA TTGCCACGGT TGATCTCTAC CCTTTCCTGC TGAGTGGCGA GATACCCAGG CCTCAGTTCG AGGAGGGGGA TACCCTTGTC GTGGGTCCGC GCGGGCCTAT GATCACTGTC ACAGGGGATG TGTCACAGCC CTATCGCTAT GAACTGGATG CAGCACCGCG CAGCGGCCAG GATCTGCTGC AATGGGTGCA GACCATCCCC GGTGTTTCCC ATGCCCTGGT GCGGGGCGTC CGGGAAACAG GTCCCTTCTC CGTCTACCTG CCCATAACCG CCTTTCGCGA CGAGTCGCTG AACGCGGGGG ATGAGATCGT CTTTTCCGCA GACCAGCGGG CAGACACCAT CGTCGTGGAG CTCGAAGGTA TTTACGAGGG TCCCTCACGC TTCGCCCTGC CCCGGGACGC CCGACTCCTG GATCTGCTGG ACAGCATCCC GGTCAATCCG GAACTCGCTG AAGTCCGCAG CGTGTCCATC AAGCGACTTA GTGTCGCCGA ACGCCAGCGT CAGTCCCTGG AGGACAGCCT GAGGCGACTT GAGACCGCCT ATCTGGGTGC CTCGTCCGCG ACCGCGGAAG AAGCGGCCAT TCGTGCGGCC GAGGCGGAGC TCATCCAGAA TTTCGTGCAG CGGGCCCGAC AGGTCGTACC CACGGGACGC ATGGTGGTCG CACATCAGGG CCAGATCAGC AACATCCGGC TGCAGGATGG CGACATCATC ACCATCCCCA GCCAGTCCGA TTCGCTGCTG ATCAGCGGCG AGGTGCTGGT GCCTCAGGCC ATGATCTACG TGGCCGGTCA GCGGGCTGAG GACTACATCC GGCGCGCCGG CGGTTTCACG GAACGGGCCG ATGAACGCAA CATCCTGGTG GTAAGGCAGA ATGGCGAAGT GGTCTCGGCC AGCGAGGTCG AGCTTCGTCC GGGTGATGAG ATCCTGGTAC TGCCAGTTGT GCCGACCAAG AACCTGCAAT TGGCTTCCAC CCTGGCGCAG ATCATCTATC ACATTGCGGT GGCGGCCCGG GTCGCGCTCA ATATCTAG
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Protein sequence | MACSRCFAGF FCFLLMVALP AAALAQSITG MGELPREQQA EPIRDVLESP PSLERRTGTY GPVDRQGLHA DDIPPFGANL FRGGFRGIRS SGINPAYRIM PGDQITLRTW GAVAMERVLP VDAQGNIFIP QVGPVQVQGT SAAELNGRVE SAIRRVFRDN VSVYTNLQGV QPVAVFVTGF VNSPGLYAGV PSDSLLYFLD QASGIDVASG SFRDIRILRG GRTIATVDLY PFLLSGEIPR PQFEEGDTLV VGPRGPMITV TGDVSQPYRY ELDAAPRSGQ DLLQWVQTIP GVSHALVRGV RETGPFSVYL PITAFRDESL NAGDEIVFSA DQRADTIVVE LEGIYEGPSR FALPRDARLL DLLDSIPVNP ELAEVRSVSI KRLSVAERQR QSLEDSLRRL ETAYLGASSA TAEEAAIRAA EAELIQNFVQ RARQVVPTGR MVVAHQGQIS NIRLQDGDII TIPSQSDSLL ISGEVLVPQA MIYVAGQRAE DYIRRAGGFT ERADERNILV VRQNGEVVSA SEVELRPGDE ILVLPVVPTK NLQLASTLAQ IIYHIAVAAR VALNI
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