Gene Tgr7_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1307 
Symbol 
ID7317798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp1403079 
End bp1404776 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content63% 
IMG OID643616197 
Productpolysaccharide export protein 
Protein accessionYP_002513380 
Protein GI220934481 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTGCT CACGCTGCTT CGCAGGATTT TTCTGCTTCC TCCTAATGGT TGCGCTGCCC 
GCTGCCGCCC TGGCGCAGTC CATTACGGGC ATGGGCGAAC TCCCCAGAGA GCAGCAGGCC
GAACCGATTC GCGATGTGCT GGAGTCTCCG CCCTCGCTGG AACGGCGTAC GGGAACCTAC
GGTCCAGTAG ACCGCCAGGG ACTGCACGCC GATGACATAC CTCCCTTTGG CGCTAATCTG
TTCAGGGGTG GCTTCAGGGG CATTCGCAGT TCGGGGATTA ACCCGGCCTA TCGCATCATG
CCCGGGGATC AGATCACCCT GCGCACCTGG GGGGCGGTTG CCATGGAGCG GGTGCTCCCC
GTGGACGCCC AGGGCAACAT CTTCATTCCC CAGGTGGGTC CCGTGCAGGT TCAGGGTACC
TCGGCGGCTG AACTGAACGG GCGCGTCGAA TCGGCCATCC GGCGGGTCTT CCGTGACAAC
GTTTCCGTGT ACACGAACCT GCAGGGGGTG CAGCCCGTCG CGGTGTTCGT CACCGGCTTC
GTCAACAGCC CGGGGCTGTA TGCGGGCGTC CCCAGTGACT CGCTGTTGTA TTTTCTCGAC
CAGGCTTCAG GCATTGATGT CGCCTCCGGC AGCTTTCGGG ATATCCGCAT CCTGCGGGGC
GGACGAACCA TTGCCACGGT TGATCTCTAC CCTTTCCTGC TGAGTGGCGA GATACCCAGG
CCTCAGTTCG AGGAGGGGGA TACCCTTGTC GTGGGTCCGC GCGGGCCTAT GATCACTGTC
ACAGGGGATG TGTCACAGCC CTATCGCTAT GAACTGGATG CAGCACCGCG CAGCGGCCAG
GATCTGCTGC AATGGGTGCA GACCATCCCC GGTGTTTCCC ATGCCCTGGT GCGGGGCGTC
CGGGAAACAG GTCCCTTCTC CGTCTACCTG CCCATAACCG CCTTTCGCGA CGAGTCGCTG
AACGCGGGGG ATGAGATCGT CTTTTCCGCA GACCAGCGGG CAGACACCAT CGTCGTGGAG
CTCGAAGGTA TTTACGAGGG TCCCTCACGC TTCGCCCTGC CCCGGGACGC CCGACTCCTG
GATCTGCTGG ACAGCATCCC GGTCAATCCG GAACTCGCTG AAGTCCGCAG CGTGTCCATC
AAGCGACTTA GTGTCGCCGA ACGCCAGCGT CAGTCCCTGG AGGACAGCCT GAGGCGACTT
GAGACCGCCT ATCTGGGTGC CTCGTCCGCG ACCGCGGAAG AAGCGGCCAT TCGTGCGGCC
GAGGCGGAGC TCATCCAGAA TTTCGTGCAG CGGGCCCGAC AGGTCGTACC CACGGGACGC
ATGGTGGTCG CACATCAGGG CCAGATCAGC AACATCCGGC TGCAGGATGG CGACATCATC
ACCATCCCCA GCCAGTCCGA TTCGCTGCTG ATCAGCGGCG AGGTGCTGGT GCCTCAGGCC
ATGATCTACG TGGCCGGTCA GCGGGCTGAG GACTACATCC GGCGCGCCGG CGGTTTCACG
GAACGGGCCG ATGAACGCAA CATCCTGGTG GTAAGGCAGA ATGGCGAAGT GGTCTCGGCC
AGCGAGGTCG AGCTTCGTCC GGGTGATGAG ATCCTGGTAC TGCCAGTTGT GCCGACCAAG
AACCTGCAAT TGGCTTCCAC CCTGGCGCAG ATCATCTATC ACATTGCGGT GGCGGCCCGG
GTCGCGCTCA ATATCTAG
 
Protein sequence
MACSRCFAGF FCFLLMVALP AAALAQSITG MGELPREQQA EPIRDVLESP PSLERRTGTY 
GPVDRQGLHA DDIPPFGANL FRGGFRGIRS SGINPAYRIM PGDQITLRTW GAVAMERVLP
VDAQGNIFIP QVGPVQVQGT SAAELNGRVE SAIRRVFRDN VSVYTNLQGV QPVAVFVTGF
VNSPGLYAGV PSDSLLYFLD QASGIDVASG SFRDIRILRG GRTIATVDLY PFLLSGEIPR
PQFEEGDTLV VGPRGPMITV TGDVSQPYRY ELDAAPRSGQ DLLQWVQTIP GVSHALVRGV
RETGPFSVYL PITAFRDESL NAGDEIVFSA DQRADTIVVE LEGIYEGPSR FALPRDARLL
DLLDSIPVNP ELAEVRSVSI KRLSVAERQR QSLEDSLRRL ETAYLGASSA TAEEAAIRAA
EAELIQNFVQ RARQVVPTGR MVVAHQGQIS NIRLQDGDII TIPSQSDSLL ISGEVLVPQA
MIYVAGQRAE DYIRRAGGFT ERADERNILV VRQNGEVVSA SEVELRPGDE ILVLPVVPTK
NLQLASTLAQ IIYHIAVAAR VALNI