| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1289 |
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| Symbol | alaS |
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| ID | 7317778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1383465 |
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| End bp | 1386062 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616177 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002513362 |
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| Protein GI | 220934463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG CCGACTTAAG AACGAGCTTC CTCGAATACT TCAGGTCCAA GGGCCACGAG
GTGGTGCCTT CGAGCCCGCT GATCCCGGGC AACGATCCCA CCCTGTTGTT CACCAATGCC
GGCATGGTGC AGTTCAAGGA TGTCTTCCTG GGTCGTGAGC AGCGCCCTTA CGTGCGCGCC
ACCAGCTCCC AGCGCTGCGT GCGCGCCGGC GGCAAGCACA ATGATCTCGA AAACGTGGGC
TACACCGCAC GTCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCAGCTT CGGCGACTAC
TTCAAGCGCG AGGCCATCCA GTACGCCTGG GAGTACCTCA CCCAGGTACT CAAGCTGCCC
GAGGAAAAGC TCTGGGTCAC GGTGTTCGAG GAGGACGACG AGGCTGCCGA CATCTGGCTC
AAGGACGTGG GCGTCAATCC CGAGCGTTTC TCCCGCATCG GCGCCTCGGA CAACTTCTGG
TCCATGGGCG ATACCGGCCC CTGCGGCCCC TGTACCGAGA TCTTCTACGA CCACGGCCCC
GAGGTTCCCG GCGGCCCGCC CGGCACCCCC GAGGCGGACG GCGACCGCTA CATCGAGATC
TGGAACCTGG TGTTCATGCA GTACGACCGG GCCAAGGACG GCACCCTGAC CCCGCTGCCG
CGTCCCTCGG TGGACACCGG CATGGGCCTG GAGCGTCTGG CCGCCGTCAT GCAGGGCGTG
CACTCCAACT ACGAGATCGA CCTGTTCCAG AACCTGATCC GCGCCATCCG TGACATGGCG
AAGGGCGCGG ATCCCACGAG CCCTTCCCTG CGGGTGATCG CCGATCACAT CCGCTCCTGC
AGCTTCCTGG TGGCCGACGG CGTCATGCCC GCCAACGAGG GCCGCGGCTA CGTGCTGCGC
CGGATCATCC GCCGCGCCGC CCGTCACGGC CACAAGCTGG GCCTGGATGA GCCCTTCTTC
CACCGTCTGG TGGGCCCCCT GGTGGCCGAG ATGGGCGAGG CCTACCCGGA GCTGGTCAAG
GCCCAGCCCA TGGTGGAGCG GGTGCTGCGC CAGGAAGAGG AGCGCTTCGC CGAGACCCTG
GAGAAGGGCC TGCGCATCCT GGAAGAGGAC ATCGACGGGC TCAAGGGCAC CGAGATCCCC
GGCAAGACCA TCTTCGTGCT CTACGACACC TACGGCTTCC CCGTGGACCT GACCGGCGAC
ATCGCCCGGG AGCGGGGCCT GACCCTGGAC ATGGCCGGTT TCGAGGCGGA GATGGAGATT
CAGCGCGAGC GCGCCCGGGC CGCCAGCCAC TTCGATGCGG ACTACCACCG CAAACTCAAG
ATCGAGGGCG AGAGTGCCTT CACCGGCTAC GAACACCTGG ATGGACAGGG CCGGGTCACC
GCCCTGTTTA AGGACGGCGA ACCCGTGGAC GCACTGGCAT CCGGCGAGCA CGGTCTGGTG
GTGCTCGATG AGACGCCTTT CTACGCAGAA TCCGGCGGCC AGGTGGGTGA TACCGGCGAG
TTGCTCGCCG AGGGCGTGAT CTTCGAGGTC ACCGACACCC GCAAGCACGG CGCCGCCCAC
GCCCACATGG GTCGCGTGGT GGAAGGGCGC ATTGCCCAGG GCGACGTGCT GGGTGCGAAG
GTCAACCAGG CCCGCCGCCA GGCGGTGGTC CTGAACCATT CCGCCACCCA CCTGATGCAC
GCCGCATTGC GGGAGATCCT GGGCGATCAC GTGCAGCAGA AGGGCTCCCT GGTGGCCCCC
GACCGTCTGC GTTTCGACTT CTCCCATTTC CAGCCCGTGA GCGCCGAGGA ACTGGAGCGC
ATCGAGCGCC GCGTCAATGA GGCCATCCGC GCCAATGCCG AGGCCGAGGC GCGCATCATG
CCCATCGACC AGGCCCTGGA GTCCGGGGCG ATGGCCCTGT TCGGCGAGAA ATACGGCGAT
GAGGTGCGGG TGCTGTCCAT GGGCGGCTTC TCCACGGAGC TTTGCGGCGG CACCCACGTG
CGTCGCACCG GCGACATCGG CGTGTTCAAG ATCCTCTCCG AGTCCGGCGT GGCCTCGGGC
ATCCGCCGCA TCGAGGCGGT CACCGGCGAG AACGCCCTGA ACTACATCGG CGAGACGGAA
AAGAACCTCT CCCGCATCGC GGAGATGGTC AAGGCCGGCC GCGGCGACCT GGACGAGAAG
GTCGCCCTGC TCGTGGAGCG CAGCCGCCAG CTGGAAAAGG AACTGGAGGC CCTCAAGGGC
AAGCTGGCCA GCGCCGCCGG TTCCAGCCTC GCCGATCAGG CCGTGGAGGT GAACGGCATC
AAGGTGCTGG CCGCCAACCT GGAAGGCGCC GATCCCAAGT CCCTGCGCGA CACCGTGGAC
CAGCTCAAGA ACAAGCTGGG CGAGGCCGCC GTGGTGCTGG CCACGGTCAA GGACGGCAAG
GTGAGCCTGG TGGCCGGCGT GACCCAGGGC CAGACCGCGC GCCTGAAGGC CGGTGAACTG
GTCAATGCCG TGGCCCAGCA GGTGGGTGGC AAGGGCGGCG GACGGCCGGA CATGGCCATG
GCCGGCGGCA CCGACCCCTC GGGACTGCCC GGTGCGCTGG CCTCGGTGCC CGACTGGGTC
CGCGAACGGC TGGGCTGA
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| Protein sequence | MKSADLRTSF LEYFRSKGHE VVPSSPLIPG NDPTLLFTNA GMVQFKDVFL GREQRPYVRA
TSSQRCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREAIQYAW EYLTQVLKLP
EEKLWVTVFE EDDEAADIWL KDVGVNPERF SRIGASDNFW SMGDTGPCGP CTEIFYDHGP
EVPGGPPGTP EADGDRYIEI WNLVFMQYDR AKDGTLTPLP RPSVDTGMGL ERLAAVMQGV
HSNYEIDLFQ NLIRAIRDMA KGADPTSPSL RVIADHIRSC SFLVADGVMP ANEGRGYVLR
RIIRRAARHG HKLGLDEPFF HRLVGPLVAE MGEAYPELVK AQPMVERVLR QEEERFAETL
EKGLRILEED IDGLKGTEIP GKTIFVLYDT YGFPVDLTGD IARERGLTLD MAGFEAEMEI
QRERARAASH FDADYHRKLK IEGESAFTGY EHLDGQGRVT ALFKDGEPVD ALASGEHGLV
VLDETPFYAE SGGQVGDTGE LLAEGVIFEV TDTRKHGAAH AHMGRVVEGR IAQGDVLGAK
VNQARRQAVV LNHSATHLMH AALREILGDH VQQKGSLVAP DRLRFDFSHF QPVSAEELER
IERRVNEAIR ANAEAEARIM PIDQALESGA MALFGEKYGD EVRVLSMGGF STELCGGTHV
RRTGDIGVFK ILSESGVASG IRRIEAVTGE NALNYIGETE KNLSRIAEMV KAGRGDLDEK
VALLVERSRQ LEKELEALKG KLASAAGSSL ADQAVEVNGI KVLAANLEGA DPKSLRDTVD
QLKNKLGEAA VVLATVKDGK VSLVAGVTQG QTARLKAGEL VNAVAQQVGG KGGGRPDMAM
AGGTDPSGLP GALASVPDWV RERLG
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