| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1282 |
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| Symbol | |
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| ID | 7317771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1376836 |
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| End bp | 1379424 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616170 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002513355 |
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| Protein GI | 220934456 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCA CCCCCGCCGC CGCCAGCCCC CAGCACACCC CCATGATGCA GCAGTACCTG
GGCATCAAGG CGCAGCACCC GGACATCCTG GTGTTCTACC GCATGGGGGA CTTCTACGAG
CTGTTCTACG ACGACGCGAT CCGCGCCGCG CGCCTGCTGG ACATCACCCT GACCAAGCGC
GGCCAGTCCG CCGGCGAACC CATCCCCATG GCGGGTGTGC CGGTGCACGC GGTGGAGAGT
TACCTGGGAC GCCTGATCCG GCTCGGAGAG TCGGTGGCCA TCTGCGAGCA GATCGGAGAC
CCGGCCACCA GCAAGGGTCC GGTGGAGCGC AAGGTGGTGC GTATCGTCAC CCCCGGCACG
GTCACGGAAG AGGCCCTGCT GGAGGAGCGC CGGGAGAACC TGCTGGTGGC GGTGTGCGGC
CGGGAGAACC GCTTCGGCAT CGCCGCCCTG GACGTGAGCA CCGGGCGCTT CCGGGTGCTG
GAAGTGGAGG GTGTCGAGGC CCTGGCCGGT GAGCTGGAGC GCCTGAACCC GGCGGAGCTG
CTGCTGCCCG AGGGCCAGCC CCTGCCCGGG ACCAAGCGCC CGGGCACGCG CCAGCGGGCG
GTGTGGCATT TCGAGGCCGA GGCTGCCCGC ACCCTGCTCA CCCGGCACTT CGGCACCCGG
GACCTGGCCG GCTTCGGCTG CGAGGGCCTG GCGCTCGCCA CCGGCGCCGC CGGGGCCCTG
CTGCAGTACG TGCAGGACAC CCAGATGAGC GCCCTGCCCC ACATCAACGG CCTGGGGGTG
GAACGCCGCG AGGACGGCAT CATCCTGGAC GCCGCCACCC GCCGGAACCT GGAGCTGACC
CAGAACCTGG CTGGCGGCCG GGAACATACC CTGGCCGCGG TGCTGGATGA GACCGCCACC
GCCATGGGCA GCCGCCTGCT GTCCCGCTGG ATCCACCAGC CCCTGCGCCA CCGGCAGGAC
CTGGAGGCGC GTCTGGGCGC CGTGGCGGAA CTGCTGGAGG GCCGCGGCCA CCGGGCGCTG
CACGAGCGGC TGCGGCGCAT CGGGGATCTG GAGCGCATCC TCTCCCGGGT GGCCCTGGGC
TCCGCCCGGC CCCGGGACCT GGTGACCCTG CGGGACTCCC TGGCCGTGCT GCCGGAGATC
CGCGGCCTGC TGGCCGGGAC CGGCGCGCCC CGGCTTGAGC AACTCGCCGG GAGCGCCGGC
GAACACCCGG CCGTGGTGGA CCTGCTCACC CGGGCGGTCA TCGAACAGCC CCCGGTGCTG
ATCCGCGACG GCGGCGTCAT CGCCCCCGGC TACGACCCGG AACTGGACGA ACTGCGCGCC
CTGTCCGGGA ACGCCGACCA GTTCCTGGTG GACCTGGAGG CCAGGGAGCG GGAACGCACC
GGCATCCACA CGCTGAAAGT GGCCTACAAC CGGGTGCACG GCTACTACAT TGAGATCAGC
CGCGCCCAGG CGGACAAGGC CCCGGACGAC TACACCCGGC GCCAGACGCT CAAGGGCGCC
GAGCGCTTCA TCACCCCGGA ACTGAAGGCC TTCGAAGACA AGGTGCTGTC CGCCCGTGAA
CGGGCCCTGG CCCGGGAGAA GGCCCTCTAC GAGGCCCTGC TGGAGGCCCT GCTGGAACCG
CTCCCGGCCC TCCAGCGAAG CGCCGAGGCC CTGGCGGAAC TGGACGTGCT GGCCTGCTTC
GCCGAGCGCG CCGAGACCCT GGGCTACAGC CGCCCGGAAC TCACCGACAC CCCCGGCATG
CTCATCGAGG ACGGCCGTCA CCCGGTGGTG GAGCAGGTGC TGGACGAGCC CTTCGTGGCC
AACGGCGTGC AACTCGCGGA CGCCCGCCGC ATGCTGGTGA TCACCGGCCC CAACATGGGC
GGCAAGTCCA CCTACATGCG CCAGACGGCG CTGATCGTGC TCATGGCCCA CCTGGGCTCT
TTCGTGCCCG CGCGCCGGAC GGTGCTCGGC CCCGTGGACC GCATCTTCAC CCGCATCGGT
GCCTCGGATG ACCTGGCCTC CGGGCGTTCC ACCTTCATGG TGGAGATGAC CGAGGCGGCC
AACATCCTCA ACAACGCCAC CGAGCACAGC CTGGTGCTCA TGGACGAGAT CGGCCGGGGC
ACCTCCACCT TTGACGGCCT GTCGCTCGCC TGGGCCTGCG CCGAGCACCT GGCCCGGCAC
AACCGGGCCT TCACCCTGTT CGCGACCCAC TACTTCGAAC TCACCGCCCT GGCCGAGCAG
CACGAGGCCA TCGCCAACGT GCACATCGAC GCCGTGGAAC ACGGCAACCG CATCGTGTTC
CTGCACGCGG TCAAGGAAGG CCCCGCCAAC CAGAGCTACG GCCTGCACGT GGCGGCCCTG
GCCGGCGTGC CCGCGGCGGT GATCAAAAAG GCCCGCCAGC GTCTGGCGGA GCTGGAACGC
CAGAACCTGG CCGGCGGGGC TGCCGACCCC CAGTTGGGCC TGTTCGCCCC CACCCCGCCA
CCCTCGCCCG CCCCGGATCC GTCCCTCGAG GCCCTGCGCG AGGCGGTCGA GGACCTGGAC
CCGGACAGCC TTTCGCCCCG GGAGGCGCTG GAGGTCGTGT ACCGGCTCAG GGCGCTATTG
GCAAAGTGA
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| Protein sequence | MSSTPAAASP QHTPMMQQYL GIKAQHPDIL VFYRMGDFYE LFYDDAIRAA RLLDITLTKR
GQSAGEPIPM AGVPVHAVES YLGRLIRLGE SVAICEQIGD PATSKGPVER KVVRIVTPGT
VTEEALLEER RENLLVAVCG RENRFGIAAL DVSTGRFRVL EVEGVEALAG ELERLNPAEL
LLPEGQPLPG TKRPGTRQRA VWHFEAEAAR TLLTRHFGTR DLAGFGCEGL ALATGAAGAL
LQYVQDTQMS ALPHINGLGV ERREDGIILD AATRRNLELT QNLAGGREHT LAAVLDETAT
AMGSRLLSRW IHQPLRHRQD LEARLGAVAE LLEGRGHRAL HERLRRIGDL ERILSRVALG
SARPRDLVTL RDSLAVLPEI RGLLAGTGAP RLEQLAGSAG EHPAVVDLLT RAVIEQPPVL
IRDGGVIAPG YDPELDELRA LSGNADQFLV DLEARERERT GIHTLKVAYN RVHGYYIEIS
RAQADKAPDD YTRRQTLKGA ERFITPELKA FEDKVLSARE RALAREKALY EALLEALLEP
LPALQRSAEA LAELDVLACF AERAETLGYS RPELTDTPGM LIEDGRHPVV EQVLDEPFVA
NGVQLADARR MLVITGPNMG GKSTYMRQTA LIVLMAHLGS FVPARRTVLG PVDRIFTRIG
ASDDLASGRS TFMVEMTEAA NILNNATEHS LVLMDEIGRG TSTFDGLSLA WACAEHLARH
NRAFTLFATH YFELTALAEQ HEAIANVHID AVEHGNRIVF LHAVKEGPAN QSYGLHVAAL
AGVPAAVIKK ARQRLAELER QNLAGGAADP QLGLFAPTPP PSPAPDPSLE ALREAVEDLD
PDSLSPREAL EVVYRLRALL AK
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