Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1280 |
Symbol | |
ID | 7317769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1373496 |
End bp | 1376372 |
Gene Length | 2877 bp |
Protein Length | 958 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643616168 |
Product | DNA helicase/exodeoxyribonuclease V, subunit B |
Protein accession | YP_002513353 |
Protein GI | 220934454 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGTCGG GACAGGCCAC CCGGATTGAG GGTGCTGCCC CCGGCACCGA CCCCCTCGAG CAACTGGCCC GACGCATCGT CGAGGACCAC CGGGACCGGC TCCCGGATCT CACCTCAGTC ACCCTCCTGC GTCCCCGTGC CCACGGGGAC GCGCGTTTGC GCCGTTTGCT GCTCGCCGCC GCCCGGGAAC AGGGGGTCGA GGCCCTGCTG GGCCCGCGCA TCACCAGCCT GCGCCAGTGG GTGATGGAAC AGGACCCCGC GCACGGCGCC CCGCTGCTCG GCGATCACGG CCGTGAACTG ATGCTCTTCG AAGCGCTGCG GGAACACCCG CAGCTGTTCG AGCGCCACGA TACCTGGCGC CTGGTGGACA CCCTGCTGGA ACTGTTCCGG GAACTGACCC TGAGCGGCGC CACCCCGCCC GCCGCCTACG AGGCCTTCGT ACAGAGGCTG CGCGAGGCCT ACGGGCTGGG CGGTGATGAT TCGGCCTGCC TGGAACCCTT GGGTCGTGAG GCCCGCATCG TGCACACCCT CTGGCACGCC TGGCTGGAGC AGCAGCGGCA GGAAGGCCGG GAAGACCCGG ATGCCCGCTA CCTGCGTGCC CTGGCATGCC TCGAACCCGG CAACATCCCC CCAGGCAGCC TGTATGCGGC CGGCTACGAT GAACTCCTGC CCGCCGAAAC CGCACTGCTC AACGGCCTGA CCCGCGAGGG TCGTCTGCAC TGGCTGGTGG GATTGCCCGC CGCGCCGGGC ATGCCGCAAC CGACGTCCGA CGGCGCAGAC CCTCAGACAC CTTTCAGCGC CTTCCTGGAC CAGGCGTTCG ACACCGACGG GGCACCTCTG CGTGAACGCG CCCTCGCCTT CGCGCAACGC CATCCCAGCA GCCCCGCCAC GCCACGTCTC GCCCTGCTCG GCGCCGAGGA CGCCGAGGCC CAGGCCGCCG CCCTGGACAT CCGCATCCGC GCCTGGCTGC TGGAAGGCCA TCGCCACATC GGCGTGGTCA CCGACGACCG GCGCCTGGCC CGGCGTCTGC GGGCCCTGCT GGAGCGCGCC GGCATCGACC TGGACGACCC GGGCGGCTGG GCCCTGTCCA CCACCCGCGC CGCCGCCGCC CTGGAACGCT GGCTGGAGGC CCTGGAAGAG GACTTCGAAT ACCAGCCCCT CATGGACGTG CTCAAGTCCC CCTTCGTGTT CCCGGAGCGC ACTGAAGAAC ACCTGTTCGC CGTGTACCGC CTGGAACAGG ACGTGATGCT GCGGGAGAAC ATCCCCAGGA ATCTGGCCCG CATGCGTGAG CACCTGTTCA AGCGAGCCCG GCGACTGGGG CCGGCCTCCG AGCGCAGCAC CCGGGCGGTG GCCAGCCTGC TGGATGCCCT GGAAGAGGCC GCCGTGCCTT TCAGGGGTCT GGTGCGGGGC GCGGCCCGGC CCGCCGGCGA TTGGCTGGCC GCCCTGCAGG AGAGCCTGCG CCGGCTGGGC ATGCAGGCAA GCCTGGAGGC GGACCCCGCC GGACGCCGGC TGCTGGAGGA AGTGCGCGCC ATGGCCGCAG ACCTCGGCTC GCGGCCGCTG TCCATGGACT GGCGGGAATT CCGCACCTGG CTGGGGCGGG TGCTGGAGAC CCGTCATTTC CGCCCCCACC CACGGCCCGC GCCGGTGCGG CTCATGAGCC TCGGCGAGAC CGCGCTGGCC CGTTTCGACG CCCTGATCAT CGCCGCCGCC GACGGTGAAC ACCTGCCCGG CCACGAACCG GTGCGCGCCC TGTTCAACGA CGGCGTGCGC CATGCCCTCG GCCTGGAGGC CTGGCATGAC CGGGTGGCCC GCCAGCAGGG CCGCTTCCGG CGCCTGCTGG AGGCCGCGCC CAGGGTGTTG ATCACCTGGC AGCGGGAACG GGGCGGCGGC CCGCAGCGCC CCGCCCCCTG GGTGGAACTG ATCGACGCCT TCCACCGCCT GGCCTGGGGC GCACCGCTCA GGGACGAGGC CCTGGAGGCC TGGCTCAAGA CGCCCGACGC CCTGGTGCAG AGCCCGGACA CGGCCCCCCT GCCGGCCACC CCGCAACGTC CGGCACCGCT GCTGCCCGCC GCCCATGTGC CTGCCAAACT CTCGGCCAGC GCCCACCAGG ATCTGATCGA CTGTCCCTAC CGCTTCTACG CCGCGCGCGG TCTGGGGCTT GCCCCCCCCG AGGAACTGGC CGAGGCCCTG AGCAAGGCCG ATTACGGCGA ACGGGTGCAT CTGTGTCTGC AGGCCTTCCA TGGCGGCACG CCGGAACTGC CCGGTCCCTG GCAGGGGCCT CTCGACGAAG CTCACCGCGC CGAGGCCCAG ACCTTGCTTG AGACCATCAG CAAAGCGGTG TTCGAAAAGG ACCTGGAAGA CAACTTCATG CACCGGGGCT GGCTCGCCCG CTGGCGCGCC CTGATCCCCG CCTACCTGGA CTGGGCCATT GAGCGGGCCG AGGCCTGGCA GGTGCAGGAC ACCGAGGTAT CACGGGAGGT GGCGCTTGCC ACCGGCACGG TCCTCAAGGG CCGTCTGGAT CGGGTGGATG CGGGCGAAGC GGGCCAGGGC GTGATCGACT ACAAGACCGG TACGCCGCCC GCTCAGAAGG AAGTGGACGC CGGCGAGGCC GTGCAGCTGC CCACCTATGC CCTGCTGCTG GAAGACAGCC AGCGGGTGGA ATACCTGCAC CTGGACCGGG ACAAGGTCAA GTCGGGTGCA AGCCTGGAAG GCGAGGCCCT GACAGCGTTG CGCGAGGCCG TGGCCACGCG ACTGCTGCAG CTGCTGGAGC GCCTGCGCGC GGGCAGCCCC ATGCCCGCCT GGGGTGACGA GAAGGCCTGC CAGCATTGCA CCATGGACGT GGTGTGCCGT CGCGGCAGCT GGGAACAGGG CCTTTGA
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Protein sequence | MSSGQATRIE GAAPGTDPLE QLARRIVEDH RDRLPDLTSV TLLRPRAHGD ARLRRLLLAA AREQGVEALL GPRITSLRQW VMEQDPAHGA PLLGDHGREL MLFEALREHP QLFERHDTWR LVDTLLELFR ELTLSGATPP AAYEAFVQRL REAYGLGGDD SACLEPLGRE ARIVHTLWHA WLEQQRQEGR EDPDARYLRA LACLEPGNIP PGSLYAAGYD ELLPAETALL NGLTREGRLH WLVGLPAAPG MPQPTSDGAD PQTPFSAFLD QAFDTDGAPL RERALAFAQR HPSSPATPRL ALLGAEDAEA QAAALDIRIR AWLLEGHRHI GVVTDDRRLA RRLRALLERA GIDLDDPGGW ALSTTRAAAA LERWLEALEE DFEYQPLMDV LKSPFVFPER TEEHLFAVYR LEQDVMLREN IPRNLARMRE HLFKRARRLG PASERSTRAV ASLLDALEEA AVPFRGLVRG AARPAGDWLA ALQESLRRLG MQASLEADPA GRRLLEEVRA MAADLGSRPL SMDWREFRTW LGRVLETRHF RPHPRPAPVR LMSLGETALA RFDALIIAAA DGEHLPGHEP VRALFNDGVR HALGLEAWHD RVARQQGRFR RLLEAAPRVL ITWQRERGGG PQRPAPWVEL IDAFHRLAWG APLRDEALEA WLKTPDALVQ SPDTAPLPAT PQRPAPLLPA AHVPAKLSAS AHQDLIDCPY RFYAARGLGL APPEELAEAL SKADYGERVH LCLQAFHGGT PELPGPWQGP LDEAHRAEAQ TLLETISKAV FEKDLEDNFM HRGWLARWRA LIPAYLDWAI ERAEAWQVQD TEVSREVALA TGTVLKGRLD RVDAGEAGQG VIDYKTGTPP AQKEVDAGEA VQLPTYALLL EDSQRVEYLH LDRDKVKSGA SLEGEALTAL REAVATRLLQ LLERLRAGSP MPAWGDEKAC QHCTMDVVCR RGSWEQGL
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