| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1245 |
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| Symbol | |
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| ID | 7317734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1336031 |
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| End bp | 1337443 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616133 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_002513318 |
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| Protein GI | 220934419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.923179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCA AGACCCTGTA CGACAAGTTG TGGGACGCCC ACGTGGTGCG CACCGAGCCC
GACGGCACGG CGCTGCTGTA TATCGACCGG CACCTGGTCC ACGAGGTGAC CTCGCCCCAG
GCCTTCGAGG GCCTGCGCCT GGCCGGGCGC AAGCCCTGGC GCACGGACAC GGTGCTGGCG
GTGCCCGATC ACAACGTGCC CACCACCCAC CGGGACCAGG GCATCAGCGA CCCGGTCTCG
CGCATCCAGG TGGAGACCCT GGACGCCAAC GTGCACGAGT TCGGCATCAC CTTCTTCCCC
ATGAACGACG TGCGCCAGGG CATCGTGCAC GTGATCGGTC CCGAGCAGGG CGCGACCCTG
CCGGGCATGA CCGTGGTGTG CGGTGATTCC CACACCTCCA CCCACGGCGC CTTCGGGGCG
CTGGCCTTCG GCATCGGCAC CTCCGAGGTG GAGCACGTGC TGGCCACCCA GTGCCTGCTG
CAGAAGAAGA TGAAGAACAT GCTGGTGTCC GTGGACGGCC GGGTGGGCCC AGGCGTCACC
GCCAAGGACA TCGTGCTGGC CATCATCGGC GAGATCGGCA CCGCCGGCGG CACCGGCTAC
GCCATCGAGT TCGGCGGCGA GGCCATCCGT GATCTGTCCA TGGAAGGCCG CATGACCGTG
TGCAACATGG CCATCGAGGC CGGTGCCCGC GCGGGCATGG TGGCGGTGGA CGAGACCACC
ATCGAGTACG TGAAGGGCCG GACCTATGCG CCCACGGGTG AACAGTGGGA AAGCGCCGTG
GCCGCCTGGC GCGAACTGAA CAGTGACGCC GATGCCCGGT TCGATCGGGT GGTGCGCCTC
GACGCCACGG CCATTGCCCC CCAGGTGAGC TGGGGCACCT CGCCGGAGAT GGTGGTGCCG
GTGACCGGCC GCGTGCCGGA TCCCGCAGAG GCCACGGACC CGGTGAAGGC TTCGGGCATG
AAGCGGGCGC TCGAGTACAT GGGGCTTGCA GCCAACACGC CCATCGAGCA GATCGCCATC
GACAAGGTGT TCATCGGTTC CTGCACCAAC TCCCGCATCG AGGACCTGCG CGCCGCCGCC
GCCGTGGTGC GCGGCCGCAA GGTGGCGGGC AACGTGAAGC TTGCCATGGT GGTGCCGGGT
TCCGGGCTGG TGAAGCAGCA GGCCGAGCAA GAGGGTCTGG ACCAGGTGTT CCTGGAGGCG
GGCTTTGAGT GGCGCGAGCC GGGCTGTTCC ATGTGCCTGG CCATGAACGC CGACCGCCTG
GAGCCGGGGG AGCGCTGCGC CTCCACCTCC AACCGCAACT TCGAGGGCCG GCAGGGGCAG
GGCGGACGCA CCCACTTGGT GAGCCCGGCC ATGGCTGCCG CTGCCGCGGT GACCGGCCAT
TTCACGGACG TGCGCCAGCT GGCGCAGTCC TGA
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| Protein sequence | MTGKTLYDKL WDAHVVRTEP DGTALLYIDR HLVHEVTSPQ AFEGLRLAGR KPWRTDTVLA
VPDHNVPTTH RDQGISDPVS RIQVETLDAN VHEFGITFFP MNDVRQGIVH VIGPEQGATL
PGMTVVCGDS HTSTHGAFGA LAFGIGTSEV EHVLATQCLL QKKMKNMLVS VDGRVGPGVT
AKDIVLAIIG EIGTAGGTGY AIEFGGEAIR DLSMEGRMTV CNMAIEAGAR AGMVAVDETT
IEYVKGRTYA PTGEQWESAV AAWRELNSDA DARFDRVVRL DATAIAPQVS WGTSPEMVVP
VTGRVPDPAE ATDPVKASGM KRALEYMGLA ANTPIEQIAI DKVFIGSCTN SRIEDLRAAA
AVVRGRKVAG NVKLAMVVPG SGLVKQQAEQ EGLDQVFLEA GFEWREPGCS MCLAMNADRL
EPGERCASTS NRNFEGRQGQ GGRTHLVSPA MAAAAAVTGH FTDVRQLAQS
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