Gene Tgr7_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1225 
Symbol 
ID7315477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1313297 
End bp1314268 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID643616113 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_002513298 
Protein GI220934399 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.633335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG ACCTCTCCAA GGCCTACACC TACACCGACT TCCAGGGGTT CTCCGACCTG 
CGCCGCCTGG CGCGGGAGGA GAGCCCGGAG GCGGCGGAGG CGGCCGCGCG GCAGTTCGAG 
GCGCTGTTCA TCCAGATGAT GCTGAAAAGC ATGCGTGATG CCATGCCCGT GGACAGCGGC 
ATGGACGGTG ACCAGGTGAA GTTCTACCAG GGGATGTTCG ACCAGCAGAT CGCCCTGGAG 
ATGTCCCGGG GCGAGGGCAT CGGCCTGCGC GAATCCCTGC TGCGCCAGTT GAACCCGGAA 
GCACCGTTGG CGAGCAGCGG TGATGGGGAA CTGCCCATGC CGGTCCACCG CCTGCCGGTC 
TACCAGCGTC CGGAGAATCC CTGGCCGCAG TCCAGGGTCG AGGCGCCGGC ATCGGCTGCG 
GCGCCCGCTG CCGCCGATGA TGCCTCGGGC CTGCCCCGCG ACTGGCGTCC CGAGTCCCCC 
GAGGCCTTCA TCCGGGATCT CTGGCCCCAT GCCGAGCGGG CCGGACAGGC CCTGGGCGTG 
GCCCCCGAGG TGCTGCTGGC CCAGTCGGCC CTGGAGACGG GGTGGGGCCG CCACATGATC 
CCCAATGCCG ATGGCAGCAA CAGCTTCAAC CTGTTCGGCA TCAAGGCGGA CAATCGCTGG 
GACGGCCCCC GGGCCCACGT ACAGACCCTG GAGTACGTGG GCGGGGTGCC TGAGCGTCAG 
CGCGCCGCCT TCCGCGCCTA TGAGCATCCC GGACAGAGCT TCGATGACTA CGTGGCGTTC 
ATCACCGGCA ATCCCCGCTA CCGGGAGGCC CTGGCGCGGG TGCCCGAGGC GGAAGGCTAC 
CTGCGGGGCC TGCAGGCGGC CGGCTACGCC ACCGATCCCG CCTACGCGGA CAAGATCCTG 
GACATCCTGG GACGCGGCAG CCTGCAGGCC GTAGTCGCCC TAAAGAATTC GGATCAGGCG 
CCGATAAGCT GA
 
Protein sequence
MNTDLSKAYT YTDFQGFSDL RRLAREESPE AAEAAARQFE ALFIQMMLKS MRDAMPVDSG 
MDGDQVKFYQ GMFDQQIALE MSRGEGIGLR ESLLRQLNPE APLASSGDGE LPMPVHRLPV 
YQRPENPWPQ SRVEAPASAA APAAADDASG LPRDWRPESP EAFIRDLWPH AERAGQALGV 
APEVLLAQSA LETGWGRHMI PNADGSNSFN LFGIKADNRW DGPRAHVQTL EYVGGVPERQ 
RAAFRAYEHP GQSFDDYVAF ITGNPRYREA LARVPEAEGY LRGLQAAGYA TDPAYADKIL 
DILGRGSLQA VVALKNSDQA PIS