| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1224 |
|---|
| Symbol | |
|---|
| ID | 7315476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1312101 |
|---|
| End bp | 1313243 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643616112 |
|---|
| Product | flagellar P-ring protein |
|---|
| Protein accession | YP_002513297 |
|---|
| Protein GI | 220934398 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1706] Flagellar basal-body P-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.794178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGT CACTTGAAAA GGCACTGTGT TCCGGCTGGC TGATGGCCCT GTGCCTGGCC
CTGGTGATCG CGCCCCAGTT CACCGCGCCG GCCAAGGCCT ACGAGCGGGT CAAGGACCTG
GCCTCGGTGG CCGGTGTGCG CAGCAACCAG CTGGTGGGCT ATGGCCTGGT GGTGGGCCTG
GACGGCAGCG GTGACCAGAC CACCCAGGCG CCGTTCACCG TGCAGTCCCT GAAGAACATG
CTGGGTCAGC TGGGCGTCAC CGTGCCGCCC AACGTGAACC CGCAGCTGCG CAACGTCGCG
GCGGTGATGA TCCATGCCGA CCTGCCGCCC TTCGCCAAGC CGGGCCAGAT GATCGACGTG
ACCGTGTCCT CCATCGGCAA TGCCTCCAGC CTGCGCGGCG GCAGCCTGCT CATGACCCCG
CTCAAGGGGG CCGACGGACA GACCTATGCC ATCGCCCAGG GCAACCTGGT GGTGGGCGGC
TTCGGCGCCG AGGGGCGCGA CGGTTCGCGC ATCAGCGTGA ACGTGCCCAG CGTGGGCCGC
ATCCCCAACG GCGCGTCCGT GGAGCGCGAG GTGCCCACCG CCTTCGCCCA GGGCGACAGC
GTGATGCTGA ACCTGCACCA GCCCGATTTC ACCACCGCCA ACCGCCTCTC CGACGTGATC
AACGACACCA TGGGCCCGGG CACCGCACGG GCCGTCGACG GTTCCTCGGT GCGGGTGAGC
GCGCCCATCG ACCCGGGCCA GCGGGTGGCC TTCGTCTCCA TGCTCGAGAA CCTCACCGTG
CGTCCCGGCG CGCCGGCCGC CAAGGTGATC GTCAACTCCC GCACCGGCAC CGTGGTGATC
GGCAGCAACG TGCAGGTGAT GCCCGCCGCC GTGACCCACG GCAGCCTCAC CGTGACCATC
ACCGAGTCCT TCGATGTTTC CCAGCCGGCC CCGCTCGCGG CCGGCGAGAC GGTGGTCACG
CCGCGCACTG ACATCGAGGT CACCGAGCAG GTCAATCCCA TGTTCCTGTT CGGCCCCGGC
GTGACCCTGG ACGAGATCGT GCGCGCCGTG AACCAGGTGG GCGCCGCCCC CGGTGACCTG
GTGGCGATCC TCGAGGCCCT GCGCCAGGCC GGCGCCCTGC GTGCCCAGCT GATCGTCATC
TAG
|
|---|
| Protein sequence | MIKSLEKALC SGWLMALCLA LVIAPQFTAP AKAYERVKDL ASVAGVRSNQ LVGYGLVVGL
DGSGDQTTQA PFTVQSLKNM LGQLGVTVPP NVNPQLRNVA AVMIHADLPP FAKPGQMIDV
TVSSIGNASS LRGGSLLMTP LKGADGQTYA IAQGNLVVGG FGAEGRDGSR ISVNVPSVGR
IPNGASVERE VPTAFAQGDS VMLNLHQPDF TTANRLSDVI NDTMGPGTAR AVDGSSVRVS
APIDPGQRVA FVSMLENLTV RPGAPAAKVI VNSRTGTVVI GSNVQVMPAA VTHGSLTVTI
TESFDVSQPA PLAAGETVVT PRTDIEVTEQ VNPMFLFGPG VTLDEIVRAV NQVGAAPGDL
VAILEALRQA GALRAQLIVI
|
|---|
| |