Gene Tgr7_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1219 
Symbol 
ID7315471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1307871 
End bp1308551 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID643616107 
Productflagellar hook capping protein 
Protein accessionYP_002513292 
Protein GI220934393 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.248011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCG CCAGCGCCAT CAGTGCAGAC ATCATGAACA AGCTGGGACT CACCTCCCAC 
GAGACCGCCA ACACGAAGGG TGATGATCGC CTGGGCCAGA GTGATTTTCT CAGGCTCATG 
ATCACCCAGC TGGAGAACCA GGATCCCTTC AAGCCCATGG AGAGCGGCGA GTTCCTGGGC 
CAGCTGGCGC AGTTCGGTAC GGTCTCCGGC ATCGAGGACC TGCAGAAATC CTTCAACCGC 
TTCAGCCAGA GCATCGCCTC GGGCCAGGCC CTGCAGGCCG CGGCCCTGGT GGACCGTCAT 
GTCACCGTCC CGGGCGACAT GATCATCATG GATCCGGCCG AGGGCATGCG GGGGGCGGTG 
CAGGTGCCGG CCTCGGCCGA GGTGGTCATC GGTGTCTACA ACCAGGCCGG CCAGCTGGTG 
CGGCGAATCC CCATGGGTAT CCAGGAGGCC GGGCTGCGCG AGTTCCACTG GGATGGCCGG 
GACGAGACCG GCACGCTGCT GGCCCCGGGT ATCTACGAAT TTGCAGGTCT GGCCAGTGAT 
GGGCGCGGCA CTGAGGCCCT GGACATGCAT CTCTCTGCTC GGGTCGAGAG CGTGAGCCTG 
GGCAACAACA ACGGTGCCCT GCTTCTCCAG GTGGAGGGGA TGGGTGAAGT GAATTTCAAC 
AAGGTGAGAC AGATCGGCTG A
 
Protein sequence
MNSASAISAD IMNKLGLTSH ETANTKGDDR LGQSDFLRLM ITQLENQDPF KPMESGEFLG 
QLAQFGTVSG IEDLQKSFNR FSQSIASGQA LQAAALVDRH VTVPGDMIIM DPAEGMRGAV 
QVPASAEVVI GVYNQAGQLV RRIPMGIQEA GLREFHWDGR DETGTLLAPG IYEFAGLASD 
GRGTEALDMH LSARVESVSL GNNNGALLLQ VEGMGEVNFN KVRQIG