Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1190 |
Symbol | |
ID | 7315441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1284757 |
End bp | 1285584 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643616077 |
Product | protein of unknown function DUF88 |
Protein accession | YP_002513263 |
Protein GI | 220934364 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGTC CTGCTGAAAT CCGCAACATG GCGCTGTTCT GCGACTTCGA GAACATCGCC CTCGGTGTGC GCGAGGCCAA GTATCCCAAG TTCGACATCG GCAAGGTGCT GGAGCGGTTG CTGCTCAAGG GCAACATCGT GGTGCGCAAG GCCTATTGCG ACTGGGACCG CTACAAGGAA TTCAAGGCGC CCATGCACGA GGCCGCCTTC GAATTGATCG AGATCCCCCA CGTGCGCCAG TCCGGCAAGA ACTCCGCCGA CATCCGCATG GTGGTGGACG CCCTGGACCT CTGCTACACC AAGGGCCACG TGGATGCCTT CGTGGTGATC AGCGGCGATT CGGATTTCTC CCCCCTGGTG GCCAAGCTCC GGGAGAACAA CAAGCTGGTG ATCGGCGTGG GCGTGAAGAA GTCCACCTCT GACCTGCTCA CCGCCGCCTG CGATGAGTTC ATCTACTACG ACGACCTGGT GCGCGAGGCC GCCCACAAGA AGCGCAAGCC CCGCAAGTCC TCCGCCAAGT CCGGCAGCAA GGAAGAGGCC CCGGCCAAGA AGGCCGAGGG ACAGGAGGGC GACGAGAAGA AGATGCAGGA GGCCCTGGAC CTGATCGTCG AAACCGCCGA GGCCTTGCAG GCAGAACGGG GCGAGGACGA GACCGTGTGG GGCTCCATGG TCAAGCAGGC CATCAAGCGC CGCAAGCCCG GTTTCAACGA GAGCTACTAC GGCTTCCGTT CCTTCAGTGC GCTGCTAGAG GCAGCGGAGA AGGAGGGTTT GATCAGGCTG GAGAAGGACG AGCGCTCGGG AGGGCATATC ATTCAGTTGG TGGAATGA
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Protein sequence | MPSPAEIRNM ALFCDFENIA LGVREAKYPK FDIGKVLERL LLKGNIVVRK AYCDWDRYKE FKAPMHEAAF ELIEIPHVRQ SGKNSADIRM VVDALDLCYT KGHVDAFVVI SGDSDFSPLV AKLRENNKLV IGVGVKKSTS DLLTAACDEF IYYDDLVREA AHKKRKPRKS SAKSGSKEEA PAKKAEGQEG DEKKMQEALD LIVETAEALQ AERGEDETVW GSMVKQAIKR RKPGFNESYY GFRSFSALLE AAEKEGLIRL EKDERSGGHI IQLVE
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