| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1166 |
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| Symbol | |
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| ID | 7315417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1254185 |
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| End bp | 1255549 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643616053 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_002513239 |
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| Protein GI | 220934340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.351032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCC TGATCAGCAT TGCCGCCTTC GTCGTCGCCA TCGGCGTCCT GGTGACCGTG
CACGAATACG GCCACTACTG GGTGGCCCGG CGCGCGGGCG TGAAGGTTTT GCGATTCTCG
GTGGGCTTCG GGCGTCCCCT GTGGCGCAGG GTGGCCGGCG CCGATCGCAC CGAGTACGTG
ATTGCCGCCA TCCCTCTGGG CGGTTACGTC AAGATGCTGG ACGAGCGCGA TCCGGACACG
CCGCCGGGCG AGGATCTGTC CCGGGCCTTC AACCGCCAGC CGGTGGGCAA GCGCATCGCC
ATCGTGGCGG CGGGTCCGGC CTTCAATTTC CTGTTCGCCA TCCTGGCCTA CTGGCTGATG
TTCATGGTGG GCATCGGCGG CGTGAAGCCG GTGGTGGGCG AGGTGGCACC CGCGTCCCTG
GCCGCCGAGG CGGGCTTCGT CAGTGGCGAC CGGCTGATCT CCGTGGCCGA TACCGAGACG
CCCACCTGGG AACTGGCTTC CCTGGCACTG CTGGAGCGCA GCCTCGACTC CCAACGGGTG
GCCGTGCGGG TGGAGACCGC CGACGGGCGC GAGTTCGTGC GTTGGCTGGA CCTGAGCGAC
ACCCGCCGGC TGCTGGATGA GGGTCCGCTC CTGGACAAGA TCGGCATCAC CCCCTGGCGT
CCGCGCCTGG ACCCGGTGCT GGGCGAGCTG GTCTCCGGCG GGCCGGCAGT CCAGGCCGGG
CTGCAGAGCG GTGACCGGGT GCTTGCGGCG GACGGCGAGC CCGTGCACAC CTGGCAGGGC
CTGGTGGAGC ACATCCAGGC CCGGCCCGAC GGCATGATGC AGCTGGAGGT GGAGCGCGAC
GGCAGCCGCC TGCAGGTGGC CGTGCGTACC GGCAGCCGCG AGGACAACGG GCGCATCGTG
GGCATCATCG GCGCCTATCC CCACGTGGAC ACCAGCCAGT TCGAGGCCAT GCGCACCACG
GTGCGTCACG GCCCCGTCGA GTCCTTCGTC AACGGTGTGA CTCGCACCTG GGACATGACC
GTGCTCACCC TGCGGGTGCT CTGGCGCCTG GTGATGGGCG AGGCCTCGGT GAAGAACATC
AGCGGGCCCA TCAGCATCGC CGAATACGCG GGCGTCACCG CCGTGATCGG TGTGGCCGCA
TTCCTGGGTT TCATGGCCAT CGTCAGTATC AGTCTCGGCA TCATCAACCT GCTGCCCATC
CCCATGCTGG ATGGCGGACA CCTGCTCTAC TACCTGGTGG AGATCGTCAA GGGCAGCCCC
GTCTCGCCCC AGGTGGAGGC CATCGGCCAG CGGGTGGGGC TGGTGATGAT CGCGCTGCTG
ATGACCCTCG CCTTCTACAA CGACATCATG AGAATACTGG GCTGA
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| Protein sequence | MSILISIAAF VVAIGVLVTV HEYGHYWVAR RAGVKVLRFS VGFGRPLWRR VAGADRTEYV
IAAIPLGGYV KMLDERDPDT PPGEDLSRAF NRQPVGKRIA IVAAGPAFNF LFAILAYWLM
FMVGIGGVKP VVGEVAPASL AAEAGFVSGD RLISVADTET PTWELASLAL LERSLDSQRV
AVRVETADGR EFVRWLDLSD TRRLLDEGPL LDKIGITPWR PRLDPVLGEL VSGGPAVQAG
LQSGDRVLAA DGEPVHTWQG LVEHIQARPD GMMQLEVERD GSRLQVAVRT GSREDNGRIV
GIIGAYPHVD TSQFEAMRTT VRHGPVESFV NGVTRTWDMT VLTLRVLWRL VMGEASVKNI
SGPISIAEYA GVTAVIGVAA FLGFMAIVSI SLGIINLLPI PMLDGGHLLY YLVEIVKGSP
VSPQVEAIGQ RVGLVMIALL MTLAFYNDIM RILG
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