Gene Tgr7_1162 details

Gene Information

• Locus tag: Tgr7_1162
• ID: 7315413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1250327
• End bp: 1250884
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643616049
• Product: ribosome recycling factor
• Protein accession: YP_002513235
• Protein GI: 220934336
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT CCATCAAGAA GGACGCCAAG GCCCGCATGG GCAAGAGCAT CGAGTCCCTG 
CGCAACGAAC TGGCGAAGAT CCGCACCGGC CGTGCCCACA CGAGCCTGCT GGATCACGTG 
ATGGTGGAGT ACTACGGCTC CGATGTGCCC ATCAGCCAGG TGGCCAACGT GAACGTTGAG 
GATGCCCGCA CCCTGACCGT CACCCCCTGG GAGAAGACCA TGGTCTCCAA GGTGGAGAAG 
GCCATCATGA CCTCCGACCT GGGCCTGAAT CCCTCCTCCA TGGGCACCGT GATCCGCGTG 
CCCATGCCGG CGCTCACCGA GGAGCGTCGC CGGGACCTGG TGAAGGTGGT GCGCGGTGAG 
GCGGAGAATG CCCGCGTGGC CATTCGCAAC ATCCGTCGCG ACGCCAACAA CGCGCTCAAG 
GCCCTGGTCA AGGGCAAGGA GATCTCCGAG GACGATGAGC GCCGCGCCCA GGACGAGATC 
CAGAAACTCA CTGACAGCCA CATCGAGGAA GTGGACAAGG TGCTCGCCGA GAAGGAAAAG 
GAACTGATGG AGGTCTGA 

 

Protein sequence

MTDSIKKDAK ARMGKSIESL RNELAKIRTG RAHTSLLDHV MVEYYGSDVP ISQVANVNVE 
DARTLTVTPW EKTMVSKVEK AIMTSDLGLN PSSMGTVIRV PMPALTEERR RDLVKVVRGE 
AENARVAIRN IRRDANNALK ALVKGKEISE DDERRAQDEI QKLTDSHIEE VDKVLAEKEK 
ELMEV